RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 GSDMBQ8TAX9 411 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 ZNF653Q96CK0 615 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 KIAA1586Q9HCI6 787 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 KLHL14Q9P2G3 628 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 RIPK3Q9Y572 518 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 PTCH2Q9Y6C5 1203 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 ZNF536O15090 1300 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 DNAJC25-GNG10A0A024R161 153 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 TXNDC9O14530 226 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 MAP3K7O43318 606 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 STAG3L1P0CL83 205 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 HSPA8P11142 646 aaKnown RBP6.11□□□□□ -1.43
RTTN-218ENST00000640408 EDNRBP24530 442 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 KCNJ6P48051 423 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 YARSP54577 528 aaKnown RBP6.11□□□□□ -1.43
RTTN-218ENST00000640408 GYS2P54840 703 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 CYP4A11Q02928 519 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 EVX2Q03828 476 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 MTERF2Q49AM1 385 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 PPP2R3CQ969Q6 453 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 PGBD1Q96JS3 809 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.11□□□□□ -1.43
RTTN-218ENST00000640408 DDX23Q9BUQ8 820 aaKnown RBP6.11□□□□□ -1.43
RTTN-218ENST00000640408 LRFN2Q9ULH4 789 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 SBF1O95248 1867 aa6.11□□□□□ -1.43
RTTN-218ENST00000640408 MSH4O15457 936 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 UBA1P22314 1058 aaKnown RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 MAPK6Q16659 721 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 TRMT1LQ7Z2T5 733 aaKnown RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 SEPT8Q92599 483 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 OSBPL1AQ9BXW6 950 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 EIF2AQ9BY44 585 aaKnown RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 PARVGQ9HBI0 331 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 TOPORSQ9NS56 1045 aaPredicted RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 HOMER3Q9NSC5 361 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 GINS2Q9Y248 185 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 NUB1Q9Y5A7 615 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 TIAM2Q8IVF5 1701 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 SOWAHBA6NEL2 793 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 ENO4A6NNW6 628 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 AKR1B10O60218 316 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 OATP04181 439 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 TCF7P36402 384 aaPredicted RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 FAM26FQ5R3K3 315 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 CCDC122Q5T0U0 273 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 CATSPER4Q7RTX7 472 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 MAP7D3Q8IWC1 876 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 MYCT1Q8N699 235 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 GPT2Q8TD30 523 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 PGBD4Q96DM1 585 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 GSDMAQ96QA5 445 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 EIF2AK1Q9BQI3 630 aaKnown RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 LXNQ9BS40 222 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 PLEKHA4Q9H4M7 779 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 LDHAP00338 332 aaKnown RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 GJA9P57773 515 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 PPP2R5CQ13362 524 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 SHROOM1Q2M3G4 852 aaPredicted RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 LRRC43Q8N309 656 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 MLKLQ8NB16 471 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 PPP1R14CQ8TAE6 165 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 MTRQ99707 1265 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 DRC3Q9H069 523 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 KIF9Q9HAQ2 790 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 PRMT7Q9NVM4 692 aaPredicted RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 TSC22D4Q9Y3Q8 395 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 EMSYQ7Z589 1322 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 NAV1Q8NEY1 1877 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 LRRIQ4A6NIV6 560 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 K7ERI5 159 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 SGPL1O95470 568 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 CCL5P13501 91 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 FERP16591 822 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 CYP11B2P19099 503 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 ADCYAP1R1P41586 468 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 MTIF2P46199 727 aaKnown RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 SNRPFP62306 86 aaKnown RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 HHATQ5VTY9 493 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 PADI6Q6TGC4 694 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 DBR1Q9UK59 544 aaKnown RBP6.1□□□□□ -1.43
RTTN-218ENST00000640408 PCDHB6Q9Y5E3 794 aa6.1□□□□□ -1.43
RTTN-218ENST00000640408 INO80B-WBP1J3KQ70 363 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 CTIFO43310 598 aaKnown RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 COBLO75128 1261 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 MYCP01106 439 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 PLA2G4BP0C869 781 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 ELNP15502 786 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 VPS41P49754 854 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 IGBP1P78318 339 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 FANCCQ00597 558 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 CC2D1AQ6P1N0 951 aaPredicted RBP6.09□□□□□ -1.43
RTTN-218ENST00000640408 TMTC1Q8IUR5 882 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 OXER1Q8TDS5 423 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 ARMC5Q96C12 935 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 CCDC51Q96ER9 411 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 GDAP1L1Q96MZ0 367 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 ANGPTL2Q9UKU9 493 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 CFAP73A6NFT4 308 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 A6NJR5 290 aa6.09□□□□□ -1.43
RTTN-218ENST00000640408 POLR2DO15514 142 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms