RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	SLC9A1	P19634	815 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	KRT9	P35527	623 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	VAMP7	P51809	220 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	MBTD1	Q05BQ5	628 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	KIZ	Q2M2Z5	673 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	ZBTB41	Q5SVQ8	909 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	MAP3K21	Q5TCX8	1036 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	PXYLP1	Q8TE99	480 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	DNAJB3	Q8WWF6	145 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	PKNOX2	Q96KN3	472 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	SCLT1	Q96NL6	688 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	MAP7D2	Q96T17	732 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	FZD8	Q9H461	694 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	CDHR5	Q9HBB8	845 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	CLDN3	O15551	220 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	MFAP3L	O75121	409 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	INHA	P05111	366 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	TPM1	P09493	284 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	ACTN1	P12814	892 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	KRT13	P13646	458 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	GART	P22102	1010 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	GPC3	P51654	580 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	ADAM17	P78536	824 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	NBPF20	Q3BBV1	942 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	CBWD6	Q4V339	395 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	CBWD3	Q5JTY5	395 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	CBWD5	Q5RIA9	395 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	INTS8	Q75QN2	995 aa	Known RBP	11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	GPIHBP1	Q8IV16	184 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	GPD1L	Q8N335	351 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	KCNN1	Q92952	543 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	ACO2	Q99798	780 aa	Known RBP	11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	MTG1	Q9BT17	334 aa	Predicted RBP	11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	MSTO1	Q9BUK6	570 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	KATNAL1	Q9BW62	490 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	MRPL4	Q9BYD3	311 aa	Known RBP	11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	TTYH3	Q9C0H2	523 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	UPF3A	Q9H1J1	476 aa	Known RBP	11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	C2orf40	Q9H1Z8	148 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	AGO2	Q9UKV8	859 aa	Known RBP	11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	CAPN11	Q9UMQ6	739 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	LUC7L2	Q9Y383	392 aa	Known RBP	11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	PTCH2	Q9Y6C5	1203 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	STYXL1	Q9Y6J8	313 aa		11.4	□□□□□ -0.58
NECAP1-223	ENST00000640091	C17orf102	A2RUQ5	167 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	ACKR2	O00590	384 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	LRRN2	O75325	713 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	PIGR	P01833	764 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	SCP2	P22307	547 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	FGFR4	P22455	802 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	GRK4	P32298	578 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	PHKA2	P46019	1235 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	GCLM	P48507	274 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	FMO5	P49326	533 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	MAP2K1	Q02750	393 aa	Predicted RBP	11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	PPP3CA	Q08209	521 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	PRPF4B	Q13523	1007 aa	Known RBP	11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	TMEM132A	Q24JP5	1023 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	FAM47C	Q5HY64	1035 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	C1orf220	Q5T0J3	134 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	TMEM139	Q8IV31	216 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	CNGA4	Q8IV77	575 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	SH3TC2	Q8TF17	1288 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	FAM84A	Q96KN4	292 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	FBXL18	Q96ME1	805 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	BAG1	Q99933	345 aa	Predicted RBP	11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	NUP58	Q9BVL2	599 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	LSM14B	Q9BX40	385 aa	Known RBP	11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	TMX1	Q9H3N1	280 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	ABHD10	Q9NUJ1	306 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	DDX20	Q9UHI6	824 aa	Known RBP	11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091		A0A0B4J269	797 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	KPNA6	O60684	536 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	NOL4	O94818	638 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	DLAT	P10515	647 aa	Known RBP	11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	HSPA6	P17066	643 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	PON1	P27169	355 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	PPP2R3A	Q06190	1150 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	ARHGEF6	Q15052	776 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	EXOC3L4	Q17RC7	722 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	SLFN12L	Q6IEE8	588 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	ZPBP2	Q6X784	338 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	KLHDC9	Q8NEP7	349 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	KIAA1524	Q8TCG1	905 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	VTI1A	Q96AJ9	217 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	CPB2	Q96IY4	423 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	NLRC4	Q9NPP4	1024 aa		11.39	□□□□□ -0.59
NECAP1-223	ENST00000640091	SMIM35	A0A1B0GVV1	85 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	ZNF233	A6NK53	670 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	EXTL3	O43909	919 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	ZEB2	O60315	1214 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	GPR32	O75388	356 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	TOM1L1	O75674	476 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	WNT7B	P56706	349 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	POLR2F	P61218	127 aa	Known RBP	11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	OSTN	P61366	133 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	POU5F1B	Q06416	359 aa		11.38	□□□□□ -0.59
NECAP1-223	ENST00000640091	TRIM14	Q14142	442 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms