RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 GRAMD1CQ8IYS0 662 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 ALDH16A1Q8IZ83 802 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 TRIB2Q92519 343 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 RAD54LQ92698 747 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 COPS5Q92905 334 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 PAGE5Q96GU1 130 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 CCDC34Q96HJ3 373 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 RHOVQ96L33 236 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 LXNQ9BS40 222 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 MLXIPQ9HAP2 919 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 MAGEF1Q9HAY2 307 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 NPHS2Q9NP85 383 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 WRAP73Q9P2S5 460 aaPredicted RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 HOOK1Q9UJC3 728 aaKnown RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 NUB1Q9Y5A7 615 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 SYCE3A1L190 88 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 GOLGA6CA6NDK9 693 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 GOLGA6BA6NDN3 693 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 LETM1O95202 739 aaPredicted RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 SUPT20HL2P0C7V6 817 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 GOLGA6DP0CG33 693 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 ZNF865P0CJ78 1059 aaPredicted RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 GARTP22102 1010 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 PTGS1P23219 599 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 GSTT1P30711 240 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 AFMP43652 599 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 QARSP47897 775 aaKnown RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 PSEN2P49810 448 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 PSMC6P62333 389 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 ARHGAP1Q07960 439 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 PNOCQ13519 176 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 RAPGEF1Q13905 1077 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 GRIN2CQ14957 1233 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 POSTNQ15063 836 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 CCDC85BQ15834 202 aaPredicted RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 UGCGQ16739 394 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 HSDL1Q3SXM5 330 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 DUSP28Q4G0W2 176 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 GJC2Q5T442 439 aaPredicted RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 TREML1Q86YW5 311 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 CCDC60Q8IWA6 550 aaPredicted RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 CHPFQ8IZ52 775 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 LARP4BQ92615 738 aaKnown RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 STAMQ92783 540 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 ERCC4Q92889 916 aaPredicted RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 NINJ1Q92982 152 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 ZFRQ96KR1 1074 aaKnown RBP8.82□□□□□ -1
SCARB2-220ENST00000640076 GOLGA6AQ9NYA3 693 aa8.82□□□□□ -1
SCARB2-220ENST00000640076 LOXHD1Q8IVV2 1947 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 A0A087WWV3 80 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 IGKV6D-21A0A0A0MT36 114 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 GSTTP1A0A1W2PQM5 241 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 E9PMD0 336 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 ADCY6O43306 1168 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 LYPLA2O95372 231 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 GH1P01241 217 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 PSAPP07602 524 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 SMPD1P17405 629 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 PSMC5P62195 406 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 LAMC2Q13753 1193 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 ARHGEF6Q15052 776 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 CT47A1Q5JQC4 288 aaPredicted RBP8.81□□□□□ -1
SCARB2-220ENST00000640076 MFSD14CQ5VZR4 134 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 SWSAP1Q6NVH7 229 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 MIS18BP1Q6P0N0 1132 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 SPATA33Q96N06 139 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 GPR20Q99678 358 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 ZIM2Q9NZV7 527 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 METRNQ9UJH8 293 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 PPT2Q9UMR5 302 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 DNM3Q9UQ16 869 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 NOP56O00567 594 aaKnown RBP8.81□□□□□ -1
SCARB2-220ENST00000640076 NKRFO15226 690 aaKnown RBP eCLIP8.81□□□□□ -1
SCARB2-220ENST00000640076 ZNF862O60290 1169 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 EYA4O95677 639 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 PLA2G4BP0C869 781 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 CYBAP13498 195 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 ELNP15502 786 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 CASP1P29466 404 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 SOX5P35711 763 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 TCF7P36402 384 aaPredicted RBP8.81□□□□□ -1
SCARB2-220ENST00000640076 SLC12A3P55017 1021 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 ZNF445P59923 1031 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 TNFAIP2Q03169 654 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 SEPT6Q14141 434 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 SV2BQ7L1I2 683 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 C4orf19Q8IY42 314 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 ZNF511Q8NB15 262 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 TRPV1Q8NER1 839 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 SPATA20Q8TB22 786 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 PIGOQ8TEQ8 1089 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 SEPT1Q8WYJ6 367 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 ATP6V0A1Q93050 837 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 NACC1Q96RE7 527 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 SPSB2Q99619 263 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 TUBE1Q9UJT0 475 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 INTUQ9ULD6 942 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 PCDHB3Q9Y5E6 796 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms