RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 HEBP1Q9NRV9 189 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 KDM3AQ9Y4C1 1321 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 ASCC3Q8N3C0 2202 aaKnown RBP4.14□□□□□ -1.75
CCDC7-213ENST00000639290 NBPF19A0A087WUL8 3843 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 FLRT2O43155 660 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 MAPK8P45983 427 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 HDAC4P56524 1084 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 RABL6Q3YEC7 729 aaPredicted RBP4.14□□□□□ -1.75
CCDC7-213ENST00000639290 C2orf27AQ580R0 203 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 ZNF484Q5JVG2 852 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 KCNV1Q6PIU1 500 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 DHX40Q8IX18 779 aaKnown RBP4.14□□□□□ -1.75
CCDC7-213ENST00000639290 MINDY1Q8N5J2 469 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 SIN3AQ96ST3 1273 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 ALG1Q9BT22 464 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 NT5C3AQ9H0P0 336 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 VRTNQ9H8Y1 702 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 PIDD1Q9HB75 910 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 ATP6V0A4Q9HBG4 840 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 RGS18Q9NS28 235 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 RNF146Q9NTX7 359 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 TOR4AQ9NXH8 423 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 CNTNAP5Q8WYK1 1306 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 PDCD11Q14690 1871 aaKnown RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 MTCL1Q9Y4B5 1905 aaKnown RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 LRRK2Q5S007 2527 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 POM121CA8CG34 1229 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 TNFSF14O43557 240 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 SH3BP5O60239 455 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 CHRNA1P02708 482 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 KLRC2P26717 231 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 ADAM17P78536 824 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 ZXDCQ2QGD7 858 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 LPCAT2Q7L5N7 544 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 TSC1Q92574 1164 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 EXOC4Q96A65 974 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 PUS3Q9BZE2 481 aaKnown RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 KANSL2Q9H9L4 492 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 IL21Q9HBE4 155 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 RXFP1Q9HBX9 757 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 PILRBQ9UKJ0 227 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 PALD1Q9ULE6 856 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 ENTPD4Q9Y227 616 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 PIAS3Q9Y6X2 628 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 FREM2Q5SZK8 3169 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 SMAPO00193 183 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 RNF40O75150 1001 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 GLUD1P00367 558 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 GHRP10912 638 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 IBSPP21815 317 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 ABL2P42684 1182 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 CLK2P49760 499 aaKnown RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 CCDC173Q0VFZ6 552 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 CCINQ13939 588 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 MYSM1Q5VVJ2 828 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 NUDT18Q6ZVK8 323 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 SLC24A5Q71RS6 500 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 RTN4RL1Q86UN2 441 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 MAPKAPK5Q8IW41 473 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 VPS52Q8N1B4 723 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 ZNF384Q8TF68 577 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 TGFBRAP1Q8WUH2 860 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 RPP25Q9BUL9 199 aaKnown RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 PRR14Q9BWN1 585 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 CSRNP2Q9H175 543 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 FBXO28Q9NVF7 368 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 GEMIN8Q9NWZ8 242 aaKnown RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 LAS1LQ9Y4W2 734 aaKnown RBP4.13□□□□□ -1.75
CCDC7-213ENST00000639290 AK5Q9Y6K8 562 aa4.13□□□□□ -1.75
CCDC7-213ENST00000639290 GREB1LQ9C091 1923 aaPredicted RBP4.12□□□□□ -1.75
CCDC7-213ENST00000639290 ESYT2A0FGR8 921 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 MYBPHLA2RUH7 354 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 CIAO1O76071 339 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 MYH8P13535 1937 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 RNASELQ05823 741 aaKnown RBP4.12□□□□□ -1.75
CCDC7-213ENST00000639290 INAVAQ3KP66 663 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 LINC00303Q3SY05 128 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 MED13LQ71F56 2210 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 FAM160B2Q86V87 743 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 SIAH1Q8IUQ4 282 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 WDR19Q8NEZ3 1342 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 KCNE4Q8WWG9 221 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 PIGKQ92643 395 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 ACDQ96AP0 544 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 FAM20AQ96MK3 541 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 TRMT61BQ9BVS5 477 aaKnown RBP4.12□□□□□ -1.75
CCDC7-213ENST00000639290 SLC25A18Q9H1K4 315 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 EPN3Q9H201 632 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 ZNF334Q9HCZ1 680 aaPredicted RBP4.12□□□□□ -1.75
CCDC7-213ENST00000639290 SUSD2Q9UGT4 822 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 MBD1Q9UIS9 605 aaPredicted RBP4.12□□□□□ -1.75
CCDC7-213ENST00000639290 PATE3B3GLJ2 98 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 CTSHP09668 335 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 SMIM10L2AP0DMW4 78 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 SMIM10L2BP0DMW5 78 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 PTGER4P35408 488 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 PTH1RQ03431 593 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 PTPAQ15257 358 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 FAM83BQ5T0W9 1011 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms