RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ERICH6BQ5W0A0 696 aa20.54■□□□□ 0.88
CLN6-220ENST00000637450 NOTUMQ6P988 496 aa20.54■□□□□ 0.88
CLN6-220ENST00000637450 SUGP1Q8IWZ8 645 aaKnown RBP20.54■□□□□ 0.88
CLN6-220ENST00000637450 CPB2Q96IY4 423 aa20.54■□□□□ 0.88
CLN6-220ENST00000637450 KLHL5Q96PQ7 755 aa20.54■□□□□ 0.88
CLN6-220ENST00000637450 CSRNP2Q9H175 543 aa20.54■□□□□ 0.88
CLN6-220ENST00000637450 ZDBF2Q9HCK1 2354 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 ARL5CA6NH57 179 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 EIF5BO60841 1220 aaKnown RBP20.53■□□□□ 0.88
CLN6-220ENST00000637450 FOSBP53539 338 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 MBTD1Q05BQ5 628 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 KIAA1841Q6NSI8 718 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 ZBTB33Q86T24 672 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 CABP7Q86V35 215 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 COLGALT2Q8IYK4 626 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 PIGOQ8TEQ8 1089 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 EMILIN2Q9BXX0 1053 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 NFKBIZQ9BYH8 718 aa20.53■□□□□ 0.88
CLN6-220ENST00000637450 A0A087WWV3 80 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 SSBP05455 408 aaKnown RBP eCLIP20.52■□□□□ 0.88
CLN6-220ENST00000637450 CNPP09543 421 aaKnown RBP20.52■□□□□ 0.88
CLN6-220ENST00000637450 GLRA2P23416 452 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 KLRC2P26717 231 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 ST3GAL1Q11201 340 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 KREMEN2Q8NCW0 462 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 PRSS33Q8NF86 280 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 GAD1Q99259 594 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 TMEM60Q9H2L4 133 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 MRPL17Q9NRX2 175 aaKnown RBP20.52■□□□□ 0.88
CLN6-220ENST00000637450 MIOSQ9NXC5 875 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 HES2Q9Y543 173 aa20.52■□□□□ 0.88
CLN6-220ENST00000637450 SOD2P04179 222 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 SPATA31C1P0DKV0 1188 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 ARF4P18085 180 aaPredicted RBP20.51■□□□□ 0.87
CLN6-220ENST00000637450 MRE11P49959 708 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 CLCN4P51793 760 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 DSC1Q08554 894 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 TMC5Q6UXY8 1006 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 TAS1R1Q7RTX1 841 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 FEZF2Q8TBJ5 459 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 CCDC43Q96MW1 224 aaKnown RBP20.51■□□□□ 0.87
CLN6-220ENST00000637450 PRRX2Q99811 253 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 MARCH5Q9NX47 278 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 DBR1Q9UK59 544 aaKnown RBP20.51■□□□□ 0.87
CLN6-220ENST00000637450 SORCS3Q9UPU3 1222 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 USTQ9Y2C2 406 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 GIT1Q9Y2X7 761 aa20.51■□□□□ 0.87
CLN6-220ENST00000637450 POTEMA6NI47 508 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 SEC24BO95487 1268 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 EFEMP2O95967 443 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 MLH1P40692 756 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 OR1G1P47890 313 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 GPR149Q86SP6 731 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 UBALD2Q8IYN6 164 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 ZDHHC14Q8IZN3 488 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 ZFP42Q96MM3 310 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 POLR3FQ9H1D9 316 aaPredicted RBP20.5■□□□□ 0.87
CLN6-220ENST00000637450 SFXN1Q9H9B4 322 aa20.5■□□□□ 0.87
CLN6-220ENST00000637450 PRG3Q9Y2Y8 225 aaPredicted RBP20.5■□□□□ 0.87
CLN6-220ENST00000637450 A0A1B0GUA9 196 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 B4GALT5O43286 388 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 ATP2B1P20020 1258 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 MCM7P33993 719 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 SCNN1GP51170 649 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 PTPN5P54829 565 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 MTMR3Q13615 1198 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 SAFBQ15424 915 aaKnown RBP eCLIP20.49■□□□□ 0.87
CLN6-220ENST00000637450 CATSPER3Q86XQ3 398 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 RNF168Q8IYW5 571 aaPredicted RBP20.49■□□□□ 0.87
CLN6-220ENST00000637450 PLCD3Q8N3E9 789 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 TDRD5Q8NAT2 981 aaKnown RBP20.49■□□□□ 0.87
CLN6-220ENST00000637450 RPS6KC1Q96S38 1066 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 HERC2P3Q9BVR0 1158 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 TRIM6Q9C030 488 aaPredicted RBP20.49■□□□□ 0.87
CLN6-220ENST00000637450 NXF3Q9H4D5 531 aaKnown RBP20.49■□□□□ 0.87
CLN6-220ENST00000637450 TUFT1Q9NNX1 390 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 LIMD1Q9UGP4 676 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 SSX2IPQ9Y2D8 614 aa20.49■□□□□ 0.87
CLN6-220ENST00000637450 USO1O60763 962 aaKnown RBP20.48■□□□□ 0.87
CLN6-220ENST00000637450 BRD1O95696 1058 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 URODP06132 367 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 AVPR2P30518 371 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 VCPP55072 806 aaKnown RBP20.48■□□□□ 0.87
CLN6-220ENST00000637450 GUCY1B3Q02153 619 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 KIAA0319Q5VV43 1072 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 SLC27A1Q6PCB7 646 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 HACE1Q8IYU2 909 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 GSTCDQ8NEC7 633 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 POLR3CQ9BUI4 534 aaPredicted RBP20.48■□□□□ 0.87
CLN6-220ENST00000637450 APOL6Q9BWW8 343 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 GPRC5CQ9NQ84 441 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 LIMCH1Q9UPQ0 1083 aa20.48■□□□□ 0.87
CLN6-220ENST00000637450 C2CD2LO14523 706 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 MED24O75448 989 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 NR1I2O75469 434 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 PDGFBP01127 241 aaPredicted RBP20.47■□□□□ 0.87
CLN6-220ENST00000637450 AKAP5P24588 427 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 TCF15Q12870 199 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 MAEAQ7L5Y9 396 aa20.47■□□□□ 0.87
CLN6-220ENST00000637450 CDR2LQ86X02 465 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms