RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 FAM162AQ96A26 154 aa17.34■□□□□ 0.37
CACNA1A-238ENST00000637276 OTUB1Q96FW1 271 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-238ENST00000637276 ZMYND12Q9H0C1 365 aa17.34■□□□□ 0.37
CACNA1A-238ENST00000637276 MTMR6Q9Y217 621 aa17.34■□□□□ 0.37
CACNA1A-238ENST00000637276 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
CACNA1A-238ENST00000637276 GRAP2O75791 330 aa17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 RASSF9O75901 435 aa17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 NFICP08651 508 aa17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 ATP5JP18859 108 aa17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 MGAT5BQ3V5L5 792 aa17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 ZNF589Q86UQ0 364 aaPredicted RBP17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 APOBEC2Q9Y235 224 aaKnown RBP17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 TRIP4Q15650 581 aaPredicted RBP17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 ST13P4Q8IZP2 240 aaPredicted RBP17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 PLEKHA8Q96JA3 519 aa17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 KDM4CQ9H3R0 1056 aa17.33■□□□□ 0.37
CACNA1A-238ENST00000637276 KRT4P19013 534 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 C6orf10Q5SRN2 563 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 PI16Q6UXB8 463 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 RELTQ969Z4 430 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 PGBD4Q96DM1 585 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 GUCY2CP25092 1073 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 SULT1E1P49888 294 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 PDAP1Q13442 181 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 AIFM3Q96NN9 605 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 NFKBIZQ9BYH8 718 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 SPASTQ9UBP0 616 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 TRIM42Q8IWZ5 723 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 PTPRHQ9HD43 1115 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 SPATA2LQ8IUW3 424 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 P2RX5Q93086 422 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 THTPAQ9BU02 230 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 KIFC3Q9BVG8 833 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 MOV10L1Q9BXT6 1211 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 KLHL25Q9H0H3 589 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 PLAAQ9Y263 795 aa17.33■□□□□ 0.36
CACNA1A-238ENST00000637276 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 TAF5Q15542 800 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 AMHR2Q16671 573 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 CLEC4FQ8N1N0 589 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 KIF12Q96FN5 646 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 SPATA33Q96N06 139 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 CD274Q9NZQ7 290 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 SLC9A8Q9Y2E8 581 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 RRN3P2A6NIE6 340 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 SDE2Q6IQ49 451 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 CMA1P23946 247 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 TRIM25Q14258 630 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 ZFP69BQ9UJL9 534 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 CARMIL3Q8ND23 1372 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 ENO1P06733 434 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 BMP3P12645 472 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 BTBD8Q5XKL5 378 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 HIBCHQ6NVY1 386 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 DTX3LQ8TDB6 740 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 MTERF3Q96E29 417 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 POLG2Q9UHN1 485 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 PRG3Q9Y2Y8 225 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 STAT3P40763 770 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 C16orf72Q14CZ0 275 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 PLCL1Q15111 1095 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 E4F1Q66K89 784 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 VPS39Q96JC1 886 aa17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-238ENST00000637276 DAB1O75553 588 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 MLNP12872 115 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 GCLMP48507 274 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 CCDC15Q0P6D6 951 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 KRT39Q6A163 491 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 SNRNP48Q6IEG0 339 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 CENPUQ71F23 418 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 LUZP2Q86TE4 346 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 CAMKK1Q8N5S9 505 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 AMNQ9BXJ7 453 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 MARCOQ9UEW3 520 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 KCNG1Q9UIX4 513 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 PFKFB2O60825 505 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 ALDH1A1P00352 501 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 ZFXP17010 805 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 NFKBIAP25963 317 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 EIF4A1P60842 406 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 CDC37Q16543 378 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 SMNDC1O75940 238 aaKnown RBP eCLIP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 PLCG1P19174 1290 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 USP44Q9H0E7 712 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 PCDHGA3Q9Y5H0 932 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 SWSAP1Q6NVH7 229 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 LRRC37BQ96QE4 947 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 YEATS2Q9ULM3 1422 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 NBPF26B4DH59 902 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 H0YCG3 227 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 SESN2P58004 480 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 PPP2R5BQ15173 497 aa17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 EPM2AIP1Q7L775 607 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 SRRM1Q8IYB3 904 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-238ENST00000637276 ENO4A6NNW6 628 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms