RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
CLN8-212ENST00000637083 LRRC45Q96CN5 670 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 JPH1Q9HDC5 661 aaPredicted RBP13.1□□□□□ -0.31
CLN8-212ENST00000637083 GPRC5CQ9NQ84 441 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 SLC9A2Q9UBY0 812 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 BUB1BO60566 1050 aaPredicted RBP13.09□□□□□ -0.31
CLN8-212ENST00000637083 KCNA2P16389 499 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 HSPA6P17066 643 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 GPC3P51654 580 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 BRDTQ58F21 947 aaPredicted RBP13.09□□□□□ -0.31
CLN8-212ENST00000637083 C11orf63Q6NUN7 778 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 ARHGEF19Q8IW93 802 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 OLIG1Q8TAK6 271 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 WNK4Q96J92 1243 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 MFSD14AQ96MC6 490 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 NT5C1BQ96P26 610 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 ATP6V0A4Q9HBG4 840 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 ZNF214Q9UL59 606 aaPredicted RBP13.09□□□□□ -0.31
CLN8-212ENST00000637083 RIPK3Q9Y572 518 aa13.09□□□□□ -0.31
CLN8-212ENST00000637083 SART1O43290 800 aaKnown RBP13.08□□□□□ -0.31
CLN8-212ENST00000637083 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.31
CLN8-212ENST00000637083 ZBTB48P10074 688 aaPredicted RBP13.08□□□□□ -0.31
CLN8-212ENST00000637083 HMGCS2P54868 508 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 MRPS25P82663 173 aaKnown RBP13.08□□□□□ -0.31
CLN8-212ENST00000637083 SUPT20HL1Q3ZLR7 823 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 XKR3Q5GH77 459 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 NOL9Q5SY16 702 aaKnown RBP13.08□□□□□ -0.31
CLN8-212ENST00000637083 C1orf220Q5T0J3 134 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 FAM71AQ8IYT1 594 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 RPUSD2Q8IZ73 545 aaKnown RBP13.08□□□□□ -0.31
CLN8-212ENST00000637083 GPD1LQ8N335 351 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 CHST13Q8NET6 341 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 PARD3BQ8TEW8 1205 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 CASKIN2Q8WXE0 1202 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 POMGNT1Q8WZA1 660 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 FBXL18Q96ME1 805 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 RPS6KC1Q96S38 1066 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 HINFPQ9BQA5 517 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 THAP2Q9H0W7 228 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 OSGEPQ9NPF4 335 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 CTTNBP2NLQ9P2B4 639 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 FZD1Q9UP38 647 aa13.08□□□□□ -0.31
CLN8-212ENST00000637083 PHIPQ8WWQ0 1821 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 SPATA31C2B4DYI2 1134 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 TISP43B9A030 160 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 FTLP02792 175 aaPredicted RBP13.08□□□□□ -0.32
CLN8-212ENST00000637083 ADRB2P07550 413 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 USP8P40818 1118 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 HNRNPH2P55795 449 aaKnown RBP13.08□□□□□ -0.32
CLN8-212ENST00000637083 HLTFQ14527 1009 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLN8-212ENST00000637083 ANGEL2Q5VTE6 544 aaKnown RBP13.08□□□□□ -0.32
CLN8-212ENST00000637083 SWSAP1Q6NVH7 229 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 CD302Q8IX05 232 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 PPM1KQ8N3J5 372 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 C1orf131Q8NDD1 294 aaKnown RBP13.08□□□□□ -0.32
CLN8-212ENST00000637083 DNERQ8NFT8 737 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 RAB17Q9H0T7 212 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 GOLPH3Q9H4A6 298 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 CYP39A1Q9NYL5 469 aa13.08□□□□□ -0.32
CLN8-212ENST00000637083 UTP11Q9Y3A2 253 aaKnown RBP13.08□□□□□ -0.32
CLN8-212ENST00000637083 SYNGAP1Q96PV0 1343 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 TMEM150BA6NC51 233 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 ANKRD63C9JTQ0 380 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 MTA2O94776 668 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 HSPA9P38646 679 aaKnown RBP13.07□□□□□ -0.32
CLN8-212ENST00000637083 PDE6CP51160 858 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 MTMR3Q13615 1198 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
CLN8-212ENST00000637083 STXBP2Q15833 593 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 TRMT1LQ7Z2T5 733 aaKnown RBP13.07□□□□□ -0.32
CLN8-212ENST00000637083 CBWD2Q8IUF1 395 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 SHC3Q92529 594 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 KCNN1Q92952 543 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 SH2D3AQ9BRG2 576 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 CYP26B1Q9NR63 512 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 RAB20Q9NX57 234 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 SEPT9Q9UHD8 586 aaPredicted RBP13.07□□□□□ -0.32
CLN8-212ENST00000637083 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
CLN8-212ENST00000637083 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
CLN8-212ENST00000637083 ZNF233A6NK53 670 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 HNRNPDLO14979 420 aaKnown RBP13.06□□□□□ -0.32
CLN8-212ENST00000637083 DDX3YO15523 660 aaKnown RBP13.06□□□□□ -0.32
CLN8-212ENST00000637083 ERLIN2O94905 339 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 GGPS1O95749 300 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 ADSSP30520 456 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 ACTR2P61160 394 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 MAP2K1Q02750 393 aaPredicted RBP13.06□□□□□ -0.32
CLN8-212ENST00000637083 CYP24A1Q07973 514 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 ABHD15Q6UXT9 468 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 DNAAF5Q86Y56 855 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 IQCKQ8N0W5 287 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 PLEKHO2Q8TD55 490 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms