RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 ZNF554Q86TJ5 538 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 CABP7Q86V35 215 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 PHC3Q8NDX5 983 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 UTP4Q969X6 686 aaKnown RBP11.55□□□□□ -0.56
CHD2-223ENST00000636306 CATSPER2Q96P56 530 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 PRMT1Q99873 361 aaKnown RBP11.55□□□□□ -0.56
CHD2-223ENST00000636306 TUBGCP2Q9BSJ2 902 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 RIC8AQ9NPQ8 531 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 TRPV5Q9NQA5 729 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 NDUFA13Q9P0J0 144 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 ARHGAP20Q9P2F6 1191 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 CNOT7Q9UIV1 285 aaKnown RBP11.55□□□□□ -0.56
CHD2-223ENST00000636306 ZMYND8Q9ULU4 1186 aaPredicted RBP11.55□□□□□ -0.56
CHD2-223ENST00000636306 SH3GLB1Q9Y371 365 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.55□□□□□ -0.56
CHD2-223ENST00000636306 SMAPO00193 183 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 ZBTB5O15062 677 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 RGS16O15492 202 aaPredicted RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 ATP9AO75110 1047 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 BCRP11274 1271 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 VEGFAP15692 232 aaPredicted RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 PRCPP42785 496 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 RCN2Q14257 317 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 NAB2Q15742 525 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 ASTE1Q2TB18 679 aaPredicted RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 TMEM259Q4ZIN3 620 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 MAEAQ7L5Y9 396 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 KLHL7Q8IXQ5 586 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 TBCKQ8TEA7 893 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 UCMAQ8WVF2 138 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 LENG1Q96BZ8 264 aaPredicted RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 MTMR8Q96EF0 704 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 DHTKD1Q96HY7 919 aaPredicted RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 PCMTD1Q96MG8 357 aaPredicted RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 NEUROG2Q9H2A3 272 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 VAT1LQ9HCJ6 419 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 GPCPD1Q9NPB8 672 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 DDX43Q9NXZ2 648 aaKnown RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 NUB1Q9Y5A7 615 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 KIF13BQ9NQT8 1826 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 BTNL10A8MVZ5 291 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 BIRC5O15392 142 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 TPD52L2O43399 206 aaKnown RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 ATP9BO43861 1147 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 HNRNPCL1O60812 293 aaKnown RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 SHBGP04278 402 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 ASLP04424 464 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 RASSF2P50749 326 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 CALCRLQ16602 461 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 TNFAIP8L3Q5GJ75 292 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 DAB2IPQ5VWQ8 1189 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 KLC3Q6P597 504 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 FAM13CQ8NE31 585 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 LRRC8CQ8TDW0 803 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 CDK5RAP3Q96JB5 506 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 BRD8Q9H0E9 1235 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 DPH5Q9H2P9 285 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 ETNK1Q9HBU6 452 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 NMRK1Q9NWW6 199 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 KLHL14Q9P2G3 628 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 HERC5Q9UII4 1024 aaKnown RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 BARX2Q9UMQ3 279 aaPredicted RBP11.54□□□□□ -0.56
CHD2-223ENST00000636306 MAPK8IP1Q9UQF2 711 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 TBC1D30Q9Y2I9 924 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 TMEM98Q9Y2Y6 226 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 TMED5Q9Y3A6 229 aa11.54□□□□□ -0.56
CHD2-223ENST00000636306 BICDL2A1A5D9 508 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 PSMA7O14818 248 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 RAD21O60216 631 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 AFPP02771 609 aaKnown RBP11.53□□□□□ -0.56
CHD2-223ENST00000636306 CASP1P29466 404 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 BAG6P46379 1132 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 FXR2P51116 673 aaKnown RBP eCLIP11.53□□□□□ -0.564e-8■■■■□ 19.3
CHD2-223ENST00000636306 ITGA9Q13797 1035 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
CHD2-223ENST00000636306 IL17AQ16552 155 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 AOC3Q16853 763 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 TATDN1Q6P1N9 297 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 UNC13DQ70J99 1090 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 EXOC3L1Q86VI1 746 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 ADGRF4Q8IZF3 695 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 NME8Q8N427 588 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 FITM2Q8N6M3 262 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 PPFIBP2Q8ND30 876 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 GMCL1P1Q8NEA9 526 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 SLC16A10Q8TF71 515 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 GFM2Q969S9 779 aaKnown RBP11.53□□□□□ -0.56
CHD2-223ENST00000636306 TRIM47Q96LD4 638 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 MXD3Q9BW11 206 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 TBCCD1Q9NVR7 557 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 PNMA3Q9UL41 463 aa11.53□□□□□ -0.56
CHD2-223ENST00000636306 KDM3AQ9Y4C1 1321 aa11.52□□□□□ -0.56
CHD2-223ENST00000636306 POTEFA5A3E0 1075 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 TRAFD1O14545 582 aaPredicted RBP11.52□□□□□ -0.57
CHD2-223ENST00000636306 PALMO75781 387 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 ITGA2BP08514 1039 aa11.52□□□□□ -0.57
CHD2-223ENST00000636306 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms