RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 FAM193BQ96PV7 902 aaPredicted RBP22.99■■□□□ 1.27
SF1-221ENST00000633899 CCDC113Q9H0I3 377 aa22.99■■□□□ 1.27
SF1-221ENST00000633899 NSUN3Q9H649 340 aaKnown RBP22.99■■□□□ 1.27
SF1-221ENST00000633899 RBM19Q9Y4C8 960 aaKnown RBP22.99■■□□□ 1.27
SF1-221ENST00000633899 CARNS1A5YM72 827 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 ZC3H11AO75152 810 aaKnown RBP eCLIP22.98■■□□□ 1.27
SF1-221ENST00000633899 PPP6R2O75170 966 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 FGF18O76093 207 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 PLS3P13797 630 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 ALDH7A1P49419 539 aaKnown RBP22.98■■□□□ 1.27
SF1-221ENST00000633899 RRAGBQ5VZM2 374 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 USP49Q70CQ1 688 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 APBB1IPQ7Z5R6 666 aaPredicted RBP22.98■■□□□ 1.27
SF1-221ENST00000633899 SPPL3Q8TCT6 385 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 POF1BQ8WVV4 589 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 PRDM6Q9NQX0 595 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 BLOC1S4Q9NUP1 217 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 TBC1D13Q9NVG8 400 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 LARSQ9P2J5 1176 aaKnown RBP22.98■■□□□ 1.27
SF1-221ENST00000633899 KANSL3Q9P2N6 904 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 STK17AQ9UEE5 414 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 ODF2LQ9ULJ1 636 aa22.98■■□□□ 1.27
SF1-221ENST00000633899 NPHP3-ACAD11A0A0J9YXS1 232 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 TBCAO75347 108 aaKnown RBP22.97■■□□□ 1.27
SF1-221ENST00000633899 FAM13AO94988 1023 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 CACNB1Q02641 598 aaPredicted RBP22.97■■□□□ 1.27
SF1-221ENST00000633899 UBE3AQ05086 875 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 ATL3Q6DD88 541 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 CCDC73Q6ZRK6 1079 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 PPP2R3CQ969Q6 453 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 GBP3Q9H0R5 595 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 NXF3Q9H4D5 531 aaKnown RBP22.97■■□□□ 1.27
SF1-221ENST00000633899 PDZD7Q9H5P4 517 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 TMEM134Q9H6X4 195 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 SPG21Q9NZD8 308 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 PUF60Q9UHX1 559 aaKnown RBP22.97■■□□□ 1.27
SF1-221ENST00000633899 CFAP45Q9UL16 551 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 HES2Q9Y543 173 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 PRUNE2Q8WUY3 3088 aa22.97■■□□□ 1.27
SF1-221ENST00000633899 SLC16A4O15374 487 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 DDIT3P35638 169 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 PBX3P40426 434 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 STAT6P42226 847 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 KRT17Q04695 432 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 STRN3Q13033 797 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 ATF7IP2Q5U623 682 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 SPIRE2Q8WWL2 714 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 REEP2Q9BRK0 252 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 MRPL4Q9BYD3 311 aaKnown RBP22.96■■□□□ 1.27
SF1-221ENST00000633899 ZHX3Q9H4I2 956 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 ARHGAP28Q9P2N2 729 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 PARP2Q9UGN5 583 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 GIT1Q9Y2X7 761 aa22.96■■□□□ 1.27
SF1-221ENST00000633899 H0YCG3 227 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 POMCP01189 267 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 MLH1P40692 756 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 BCAR1P56945 870 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 DCAF4L1Q3SXM0 396 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 ARSHQ5FYA8 562 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 TCEAL5Q5H9L2 206 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 KCNG4Q8TDN1 519 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 MICAL1Q8TDZ2 1067 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 LRRC15Q8TF66 581 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 RPS6KC1Q96S38 1066 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 GAD1Q99259 594 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 RNF39Q9H2S5 420 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 COG5Q9UP83 839 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 USP20Q9Y2K6 914 aa22.95■■□□□ 1.26
SF1-221ENST00000633899 MYO7AQ13402 2215 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 ARL5CA6NH57 179 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 TTLL13PA6NNM8 815 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 CUTAO60888 179 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 AKAP5P24588 427 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 PLCB3Q01970 1234 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 SV2BQ7L1I2 683 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 MYCT1Q8N699 235 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 MRPS27Q92552 414 aaKnown RBP22.94■■□□□ 1.26
SF1-221ENST00000633899 HLA-CQ95604 372 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 TMEM169Q96HH4 297 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 NRDE2Q9H7Z3 1164 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 PARVGQ9HBI0 331 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 TLR9Q9NR96 1032 aa22.94■■□□□ 1.26
SF1-221ENST00000633899 NT5C1B-RDH14C9J2C7 533 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 EDN1P05305 212 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 DNAJB1P25685 340 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 ME1P48163 572 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 DNM1Q05193 864 aaKnown RBP22.93■■□□□ 1.26
SF1-221ENST00000633899 AAK1Q2M2I8 961 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 NT5DC1Q5TFE4 455 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 SLC39A11Q8N1S5 342 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 ATXN2LQ8WWM7 1075 aaKnown RBP22.93■■□□□ 1.26
SF1-221ENST00000633899 NTPCRQ9BSD7 190 aaKnown RBP22.93■■□□□ 1.26
SF1-221ENST00000633899 PANK2Q9BZ23 570 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 LZTS1Q9Y250 596 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 REV3LO60673 3130 aa22.93■■□□□ 1.26
SF1-221ENST00000633899 ZMYM2Q9UBW7 1377 aa22.92■■□□□ 1.26
SF1-221ENST00000633899 BRD1O95696 1058 aa22.92■■□□□ 1.26
SF1-221ENST00000633899 SCNN1GP51170 649 aa22.92■■□□□ 1.26
SF1-221ENST00000633899 GIT2Q14161 759 aa22.92■■□□□ 1.26
SF1-221ENST00000633899 EEF1DP3Q658K8 133 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms