RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ITGB3BPQ13352 177 aaPredicted RBP8.71□□□□□ -1.02
GPC3-204ENST00000631057 BIRC3Q13489 604 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 MTMR1Q13613 665 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 DHX34Q14147 1143 aaKnown RBP8.71□□□□□ -1.02
GPC3-204ENST00000631057 TRADDQ15628 312 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 SPDYCQ5MJ68 293 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 KCTD16Q68DU8 428 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 HAUS6Q7Z4H7 955 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 C4orf19Q8IY42 314 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 NIM1KQ8IY84 436 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 C10orf67Q8IYJ2 551 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 SH2D3CQ8N5H7 860 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 UBL4BQ8N7F7 174 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 RDH13Q8NBN7 331 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 MORC4Q8TE76 937 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
GPC3-204ENST00000631057 ARHGEF26Q96DR7 871 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 ZBED3Q96IU2 234 aaPredicted RBP8.71□□□□□ -1.02
GPC3-204ENST00000631057 RNPC3Q96LT9 517 aaKnown RBP8.71□□□□□ -1.02
GPC3-204ENST00000631057 GLIS2Q9BZE0 524 aaPredicted RBP8.71□□□□□ -1.02
GPC3-204ENST00000631057 PCIF1Q9H4Z3 704 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 ANKEF1Q9NU02 776 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.71□□□□□ -1.023e-8■■■■■ 41.7
GPC3-204ENST00000631057 PKD2L1Q9P0L9 805 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.71□□□□□ -1.02
GPC3-204ENST00000631057 AMACRQ9UHK6 382 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 RASAL2Q9UJF2 1139 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 DOCK5Q9H7D0 1870 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 COL4A5P29400 1685 aa8.71□□□□□ -1.02
GPC3-204ENST00000631057 WDR64B1ANS9 1081 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 TTI1O43156 1089 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 RTN2O75298 545 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 MTA2O94776 668 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 GGPS1O95749 300 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 FTLP02792 175 aaPredicted RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 GZMAP12544 262 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 CTNNA1P35221 906 aaKnown RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 GCLMP48507 274 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 NCKAP1LP55160 1127 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 MCCD1P59942 119 aaPredicted RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 PSMC5P62195 406 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 GPC5P78333 572 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 MRPS9P82933 396 aaKnown RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 KRT76Q01546 638 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 POU5F1Q01860 360 aaKnown RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 PPP3CAQ08209 521 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 PDCLQ13371 301 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 UAP1Q16222 522 aaPredicted RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 AGBL2Q5U5Z8 902 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 B4GALNT4Q76KP1 1039 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 MAEAQ7L5Y9 396 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 DDX42Q86XP3 938 aaKnown RBP eCLIP8.7□□□□□ -1.02
GPC3-204ENST00000631057 SPATS2Q86XZ4 545 aaKnown RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 IFNL1Q8IU54 200 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 ARHGEF19Q8IW93 802 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 CDAN1Q8IWY9 1227 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 EFCAB13Q8IY85 973 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 RPUSD2Q8IZ73 545 aaKnown RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 RDM1Q8NG50 284 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 SYTL5Q8TDW5 730 aaPredicted RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 SLC20A1Q8WUM9 679 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 RPS6KC1Q96S38 1066 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 CBWD1Q9BRT8 395 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 KIAA1683Q9H0B3 1180 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 THAP2Q9H0W7 228 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 SLC38A10Q9HBR0 1119 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 ZNF277Q9NRM2 450 aaPredicted RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 TAS2R14Q9NYV8 317 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 CTTNBP2NLQ9P2B4 639 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 PGAP2Q9UHJ9 254 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 ZNRF3Q9ULT6 936 aa8.7□□□□□ -1.02
GPC3-204ENST00000631057 CTDP1Q9Y5B0 961 aaPredicted RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 ASTN2O75129 1339 aaPredicted RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 ATXN2Q99700 1313 aaKnown RBP8.7□□□□□ -1.02
GPC3-204ENST00000631057 GRXCR2A6NFK2 248 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 H0YGN5 161 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 NDUFAB1O14561 156 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 SLC16A4O15374 487 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 ZBED4O75132 1171 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 FDX1P10109 184 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 GBP1P32455 592 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 LSP1P33241 339 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 MDH1P40925 334 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 ATP1A2P50993 1020 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 SMTNP53814 917 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 MFAP3P55082 362 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 DLG4P78352 724 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 DR1Q01658 176 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 PRPF4BQ13523 1007 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 C1orf220Q5T0J3 134 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 DCAF12L1Q5VU92 463 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 XRRA1Q6P2D8 792 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 TMC3Q7Z5M5 1100 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 USP37Q86T82 979 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 PALB2Q86YC2 1186 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 FAM71AQ8IYT1 594 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 UBLCP1Q8WVY7 318 aaPredicted RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 PPM1EQ8WY54 764 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 MTFR1LQ9H019 292 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 WNT8AQ9H1J5 351 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms