RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 AKT3Q9Y243 479 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 SIK3Q9Y2K2 1263 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 LUC7L2Q9Y383 392 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 STYXL1Q9Y6J8 313 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 ARID2Q68CP9 1835 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 SMIM35A0A1B0GVV1 85 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 ANKRD63C9JTQ0 380 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 EXTL3O43909 919 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 PRKCBP05771 671 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 C6orf222P0C671 652 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 ADSSP30520 456 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 CASP14P31944 242 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 KCNJ6P48051 423 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 VAMP7P51809 220 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 ADKP55263 362 aaKnown RBP8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 MCCD1P59942 119 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 PTENP60484 403 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 PURAQ00577 322 aaKnown RBP8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 CETN1Q12798 172 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 LRMPQ12912 555 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 BFSP1Q12934 665 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 DRP2Q13474 957 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 ARID5BQ14865 1188 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 PTPN21Q16825 1174 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 MARCH8Q5T0T0 291 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 NFRKBQ6P4R8 1299 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 SLC39A4Q6P5W5 647 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 ZNF410Q86VK4 478 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 ZNF710Q8N1W2 664 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 GPD1LQ8N335 351 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 SLAIN1Q8ND83 568 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 KAT2BQ92831 832 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 SLC35C1Q96A29 364 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 FBXL18Q96ME1 805 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 NLRP4Q96MN2 994 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 BAG1Q99933 345 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 MTG1Q9BT17 334 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 TMX1Q9H3N1 280 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 MMRN2Q9H8L6 949 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 PRMT7Q9NVM4 692 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 DAAM1Q9Y4D1 1078 aa8.22□□□□□ -1.09
PTP4A1-206ENST00000627002 DOCK5Q9H7D0 1870 aa8.21□□□□□ -1.09
PTP4A1-206ENST00000627002 A0A0B4J269 797 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 TTC26A0AVF1 554 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 C17orf102A2RUQ5 167 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 MBLAC1A4D2B0 266 aaPredicted RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 ZNF233A6NK53 670 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 TISP43B9A030 160 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 INO80B-WBP1J3KQ70 363 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 ACKR2O00590 384 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 PMM2O15305 246 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 P4HA2O15460 535 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 ARHGAP6O43182 974 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 MSCO60682 206 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 TOM1L1O75674 476 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 ELNP15502 786 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 CST5P28325 142 aaPredicted RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 GTF2H1P32780 548 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 KRT9P35527 623 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 MATR3P43243 847 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 FXR1P51114 621 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 ZBED6P86452 979 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 CCZ1BP86790 482 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 CCZ1P86791 482 aaPredicted RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 BEX3Q00994 111 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 PCBP1Q15365 356 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 SNRNP35Q16560 246 aaKnown RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 FAM187BQ17R55 369 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 EXOC3L4Q17RC7 722 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 GNASQ5JWF2 1037 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 MAP3K21Q5TCX8 1036 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 GBP6Q6ZN66 633 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 SRGAP1Q7Z6B7 1085 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 C7orf31Q8N865 590 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 RDH13Q8NBN7 331 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 OR8K1Q8NGG5 319 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 TMC2Q8TDI7 906 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 CPLX3Q8WVH0 158 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 LMBR1Q8WVP7 490 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 PRIMPOLQ96LW4 560 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 MFSD14AQ96MC6 490 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 DNAJC7Q99615 494 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 TARS2Q9BW92 718 aaKnown RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 LSM14BQ9BX40 385 aaKnown RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 INO80BQ9C086 356 aaPredicted RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 TTYH3Q9C0H2 523 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 NUCKS1Q9H1E3 243 aaKnown RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 FZD8Q9H461 694 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 PLCB1Q9NQ66 1216 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 XPNPEP3Q9NQH7 507 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 ABHD10Q9NUJ1 306 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 SETD4Q9NVD3 440 aa8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 ZNHIT6Q9NWK9 470 aaKnown RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 AGO2Q9UKV8 859 aaKnown RBP8.21□□□□□ -1.1
PTP4A1-206ENST00000627002 GOLGA8IPA6NC78 632 aa8.2□□□□□ -1.1
PTP4A1-206ENST00000627002 GOLGA8JA6NMD2 632 aa8.2□□□□□ -1.1
PTP4A1-206ENST00000627002 CLDN3O15551 220 aa8.2□□□□□ -1.1
PTP4A1-206ENST00000627002 CCP110O43303 1012 aa8.2□□□□□ -1.1
PTP4A1-206ENST00000627002 ZNF500O60304 480 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms