RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 TMEM87AQ8NBN3 555 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 SNX29Q8TEQ0 813 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 PRIMPOLQ96LW4 560 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 C2orf40Q9H1Z8 148 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 BHMT2Q9H2M3 363 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 FZD8Q9H461 694 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 EIF4ENIF1Q9NRA8 985 aaKnown RBP12□□□□□ -0.49
SSBP4-215ENST00000625926 PRMT7Q9NVM4 692 aaPredicted RBP12□□□□□ -0.49
SSBP4-215ENST00000625926 DNAJB4Q9UDY4 337 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 FAN1Q9Y2M0 1017 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 GIT1Q9Y2X7 761 aa12□□□□□ -0.49
SSBP4-215ENST00000625926 ZSCAN21Q9Y5A6 473 aaPredicted RBP12□□□□□ -0.49
SSBP4-215ENST00000625926 ARL5CA6NH57 179 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 INPPL1O15357 1258 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 B4GALT5O43286 388 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 NR1I2O75469 434 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 CTSAP10619 480 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 HOXB8P17481 243 aaPredicted RBP11.99□□□□□ -0.49
SSBP4-215ENST00000625926 PPP2R5AQ15172 486 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 FAM187BQ17R55 369 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 TMEM31Q5JXX7 168 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 CDCA2Q69YH5 1023 aaPredicted RBP11.99□□□□□ -0.49
SSBP4-215ENST00000625926 ANKRD54Q6NXT1 300 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 LLGL2Q6P1M3 1020 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 DEPTORQ8TB45 409 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 CASP10Q92851 521 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 GAD1Q99259 594 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 ZBP1Q9H171 429 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 DDX19AQ9NUU7 478 aaKnown RBP11.99□□□□□ -0.49
SSBP4-215ENST00000625926 DNM3Q9UQ16 869 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 USP15Q9Y4E8 981 aaPredicted RBP11.99□□□□□ -0.49
SSBP4-215ENST00000625926 HES2Q9Y543 173 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 IRAK3Q9Y616 596 aa11.99□□□□□ -0.49
SSBP4-215ENST00000625926 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.98□□□□□ -0.49
SSBP4-215ENST00000625926 NRP1O14786 923 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 B4GALT3O60512 393 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 GPR37L1O60883 481 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 CLASP2O75122 1294 aaKnown RBP11.98□□□□□ -0.49
SSBP4-215ENST00000625926 NPTXRO95502 500 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 MLH1P40692 756 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 NAMPTP43490 491 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 PRPF4BQ13523 1007 aaKnown RBP11.98□□□□□ -0.49
SSBP4-215ENST00000625926 IL17AQ16552 155 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 MAPK6Q16659 721 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 TMEM132AQ24JP5 1023 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
SSBP4-215ENST00000625926 ALYREFQ86V81 257 aaKnown RBP11.98□□□□□ -0.49
SSBP4-215ENST00000625926 CDR2LQ86X02 465 aaPredicted RBP11.98□□□□□ -0.49
SSBP4-215ENST00000625926 COLGALT2Q8IYK4 626 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 BCL7CQ8WUZ0 217 aaPredicted RBP11.98□□□□□ -0.49
SSBP4-215ENST00000625926 BSNDQ8WZ55 320 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 KIFAP3Q92845 792 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 IFT74Q96LB3 600 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 APOL6Q9BWW8 343 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 S1PR5Q9H228 398 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 PARP2Q9UGN5 583 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 HCFC2Q9Y5Z7 792 aa11.98□□□□□ -0.49
SSBP4-215ENST00000625926 MYO9BQ13459 2157 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 PP2D1A8MPX8 630 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 E9PMD0 336 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 ACKR2O00590 384 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 N4BP3O15049 544 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 DCXO43602 365 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 AKAP5P24588 427 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 CDC25AP30304 524 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 OR1G1P47890 313 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 SCNN1GP51170 649 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 EFNA5P52803 228 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 ATP2C1P98194 919 aaPredicted RBP11.97□□□□□ -0.49
SSBP4-215ENST00000625926 TPRNQ4KMQ1 711 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 SYCE2Q6PIF2 218 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 AUTS2Q8WXX7 1259 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 SUSD6Q92537 303 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 ZFP42Q96MM3 310 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 LRFN3Q9BTN0 628 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 PHF7Q9BWX1 381 aaPredicted RBP11.97□□□□□ -0.49
SSBP4-215ENST00000625926 NXF3Q9H4D5 531 aaKnown RBP11.97□□□□□ -0.49
SSBP4-215ENST00000625926 POLD4Q9HCU8 107 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 MIOSQ9NXC5 875 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
SSBP4-215ENST00000625926 PRG3Q9Y2Y8 225 aaPredicted RBP11.97□□□□□ -0.49
SSBP4-215ENST00000625926 RALGAPA2Q2PPJ7 1873 aa11.97□□□□□ -0.49
SSBP4-215ENST00000625926 LOC730098B7Z3J9 87 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 PRKCBP05771 671 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 LIG1P18858 919 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 ITIH3Q06033 890 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 DSC1Q08554 894 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 CBX2Q14781 532 aaPredicted RBP11.96□□□□□ -0.49
SSBP4-215ENST00000625926 PTPN14Q15678 1187 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 ARL6IP4Q66PJ3 421 aaKnown RBP11.96□□□□□ -0.49
SSBP4-215ENST00000625926 PPFIBP1Q86W92 1011 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 RNF135Q8IUD6 432 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 KCTD17Q8N5Z5 321 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 GSTCDQ8NEC7 633 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 ADPGKQ9BRR6 497 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 COLEC11Q9BWP8 271 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 APOL5Q9BWW9 433 aa11.96□□□□□ -0.49
SSBP4-215ENST00000625926 VN1R3Q9BXE9 311 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms