RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 TLDC2A0PJX2 215 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 PLS3P13797 630 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 CHRNB2P17787 502 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 CLUL1Q15846 466 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 SPDYCQ5MJ68 293 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 EPS8L1Q8TE68 723 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 TMEM117Q9H0C3 514 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 PABPC3Q9H361 631 aaKnown RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 GRHL1Q9NZI5 618 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 SMIM23A6NLE4 172 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 PHF20L1A8MW92 1017 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 P4HA2O15460 535 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 DHX15O43143 795 aaKnown RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 CYP26A1O43174 497 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 PAEPP09466 180 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 PYGMP11217 842 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 CHRNA3P32297 505 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 RPL21P46778 160 aaKnown RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 MXI1P50539 228 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 PEX5P50542 639 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 UBAP2Q5T6F2 1119 aaKnown RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 STYK1Q6J9G0 422 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 POTEAQ6S8J7 498 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 HAUS6Q7Z4H7 955 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 FAM160B2Q86V87 743 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 HOOK3Q86VS8 718 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 SUGP1Q8IWZ8 645 aaKnown RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 PPM1KQ8N3J5 372 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 GPRC5CQ9NQ84 441 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 ZNF70Q9UC06 446 aaPredicted RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 TCRBV7S2A1N4TA0A589 114 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 NFIBO00712 420 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 SLC16A4O15374 487 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 NUDT17P0C025 328 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 DRG2P55039 364 aaKnown RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 MAP2K1Q02750 393 aaPredicted RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 DENND2CQ68D51 928 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 CCDC137Q6PK04 289 aaKnown RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 SLC47A2Q86VL8 602 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 FAM151AQ8WW52 585 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 SEC16BQ96JE7 1060 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 KREMEN1Q96MU8 473 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.12□□□□□ -0.47
VARS2-213ENST00000625423 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 FEM1BQ9UK73 627 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 COL2A1P02458 1487 aaPredicted RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 ADRB2P07550 413 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 MMEP08473 750 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 CTNNA2P26232 953 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 HSD17B4P51659 736 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 GTF2A1P52655 376 aaPredicted RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 PEX3P56589 373 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 ALCAMQ13740 583 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 SLC29A2Q14542 456 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 SEL1L2Q5TEA6 688 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 CCDC121Q6ZUS5 278 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 C3orf20Q8ND61 904 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 UHMK1Q8TAS1 419 aaKnown RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 CABS1Q96KC9 395 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 RPS6KC1Q96S38 1066 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 VEZTQ9HBM0 779 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 NOCTQ9UK39 431 aaKnown RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 RPTORQ8N122 1335 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 MAPTP10636 758 aaKnown RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 ACTN3Q08043 901 aaPredicted RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 SPP2Q13103 211 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 TCEAL1Q15170 157 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 C12orf56Q8IXR9 622 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 FAM71AQ8IYT1 594 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 VTI1AQ96AJ9 217 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 TMEM39BQ9GZU3 492 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 SEMA4AQ9H3S1 761 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 PCYOX1Q9UHG3 505 aa12.12□□□□□ -0.47
VARS2-213ENST00000625423 DBR1Q9UK59 544 aaKnown RBP12.12□□□□□ -0.47
VARS2-213ENST00000625423 HSPA6P17066 643 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 QARSP47897 775 aaKnown RBP12.11□□□□□ -0.47
VARS2-213ENST00000625423 GTF2BQ00403 316 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 BYSLQ13895 437 aaKnown RBP12.11□□□□□ -0.47
VARS2-213ENST00000625423 RASA3Q14644 834 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 TNIP1Q15025 636 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 LLGL1Q15334 1064 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 CPLX4Q7Z7G2 160 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 CBWD2Q8IUF1 395 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 CCDC13Q8IYE1 715 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 SEMA4DQ92854 862 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 ELMO3Q96BJ8 720 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 NUP85Q9BW27 656 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 CNOT10Q9H9A5 744 aaKnown RBP12.11□□□□□ -0.47
VARS2-213ENST00000625423 PTPN22Q9Y2R2 807 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
VARS2-213ENST00000625423 MYH11P35749 1972 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 C5orf60A6NFR6 353 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 SPOPO43791 374 aa12.11□□□□□ -0.47
VARS2-213ENST00000625423 PLA2G6O60733 806 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms