RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 RBM8AQ9Y5S9 174 aaKnown RBP3.57□□□□□ -1.84
SCARNA4-202ENST00000625402 RPTORQ8N122 1335 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 H3BML4 177 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 MATN2O00339 956 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 APAF1O14727 1248 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 TPP1O14773 563 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 B3GALT2O43825 422 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 AKR1B10O60218 316 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 CTNND1O60716 968 aaKnown RBP3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 DTNBO60941 627 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 CAND2O75155 1236 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 TUSC2O75896 110 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 TOX4O94842 621 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 FARP2O94887 1054 aaPredicted RBP3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 UBXN7O94888 489 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 FSBPO95073 299 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 AMY1AP04745 511 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 TRIM27P14373 513 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 FPR1P21462 350 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 PCSK1P29120 753 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 SREBF1P36956 1147 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 SARSP49591 514 aaKnown RBP3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 AFF3P51826 1226 aaKnown RBP3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 MAP2K6P52564 334 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 PURAQ00577 322 aaKnown RBP3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 USP10Q14694 798 aaKnown RBP3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 LLGL1Q15334 1064 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 RNF151Q2KHN1 245 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 FAM26FQ5R3K3 315 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 KSR2Q6VAB6 950 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 MIGA2Q7L4E1 593 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 CHST15Q7LFX5 561 aaPredicted RBP3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 TAS1R1Q7RTX1 841 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 TRMT2AQ8IZ69 625 aaKnown RBP3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 KLHL36Q8N4N3 616 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 REPS2Q8NFH8 660 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 CFHR4Q92496 578 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 HDAC10Q969S8 669 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 RGMAQ96B86 450 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 MRGPRX4Q96LA9 322 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 SAMD11Q96NU1 681 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 UIMC1Q96RL1 719 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 PPP1R16BQ96T49 567 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 GPHA2Q96T91 129 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 CGRRF1Q99675 332 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 SARGQ9BW04 601 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 CARD11Q9BXL7 1154 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 TMEM168Q9H0V1 697 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 OR10A2Q9H208 303 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 DDX21Q9NR30 783 aaKnown RBP eCLIP3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 C1orf112Q9NSG2 853 aa3.56□□□□□ -1.84
SCARNA4-202ENST00000625402 FAM171A2A8MVW0 826 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 RFXAPO00287 272 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 B4GALT3O60512 393 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 ITGA10O75578 1167 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 CYP1A1P04798 512 aaPredicted RBP3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 KRT18P05783 430 aaKnown RBP3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 MYL1P05976 194 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 RHCEP18577 417 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 ECHS1P30084 290 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 GUCY1A2P33402 732 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 KIR2DL3P43628 341 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 MEOX1P50221 254 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 RHBDL3P58872 404 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 ATP2C1P98194 919 aaPredicted RBP3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 ATP8B2P98198 1209 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 CDC42EP1Q00587 391 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 RHDQ02161 417 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 UBE4AQ14139 1066 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 ZNF124Q15973 351 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 MAN2A1Q16706 1144 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 PRAMEF14Q5SWL7 426 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 SYCP2LQ5T4T6 812 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 RALYLQ86SE5 291 aaKnown RBP3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 RHOT1Q8IXI2 618 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 CAMKK1Q8N5S9 505 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 CELF5Q8N6W0 485 aaKnown RBP3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 POU5F2Q8N7G0 328 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 ANKRD53Q8N9V6 530 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 LINC01356Q8N9X3 169 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 PLA2G15Q8NCC3 412 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 OR7D4Q8NG98 312 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 IFI44Q8TCB0 444 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 GFM2Q969S9 779 aaKnown RBP3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 SLC7A6OSQ96CW6 309 aaPredicted RBP3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 C1GALT1C1Q96EU7 318 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 NT5C1BQ96P26 610 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 C7orf25Q9BPX7 421 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 C14orf93Q9H972 538 aaKnown RBP3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 GPRC5DQ9NZD1 345 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 RCAN3Q9UKA8 241 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 FAM50BQ9Y247 325 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 NR2E3Q9Y5X4 410 aa3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 CFAP20Q9Y6A4 193 aaKnown RBP3.55□□□□□ -1.84
SCARNA4-202ENST00000625402 C9orf118A6NHY6 69 aa3.54□□□□□ -1.84
SCARNA4-202ENST00000625402 FAM227AF5H4B4 570 aa3.54□□□□□ -1.84
SCARNA4-202ENST00000625402 PMM2O15305 246 aa3.54□□□□□ -1.84
SCARNA4-202ENST00000625402 ARHGAP6O43182 974 aa3.54□□□□□ -1.84
SCARNA4-202ENST00000625402 MTSS1O43312 755 aa3.54□□□□□ -1.84
SCARNA4-202ENST00000625402 SGTAO43765 313 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms