RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 CBWD2Q8IUF1 395 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 FAM71AQ8IYT1 594 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 ZNF280CQ8ND82 737 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 SPIRE2Q8WWL2 714 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 PIK3R5Q8WYR1 880 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 ARL8AQ96BM9 186 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 NAP1L3Q99457 506 aaPredicted RBP8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 NTPCRQ9BSD7 190 aaKnown RBP8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 C17orf75Q9HAS0 396 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 KMT5AQ9NQR1 393 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 PICK1Q9NRD5 415 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 GABBR1Q9UBS5 961 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 ZNF112Q9UJU3 913 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 PARP14Q460N5 1801 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 POLR2AP24928 1970 aaKnown RBP8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 RTN2O75298 545 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 ECHS1P30084 290 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 USP8P40818 1118 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 MFAP3P55082 362 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 GPC5P78333 572 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 MAP2K1Q02750 393 aaPredicted RBP8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 DCAF12L1Q5VU92 463 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 KRT39Q6A163 491 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 SNRNP48Q6IEG0 339 aaKnown RBP8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 C11orf63Q6NUN7 778 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 DLK2Q6UY11 383 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 REPS2Q8NFH8 660 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 NSUN6Q8TEA1 469 aaKnown RBP8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 PARD3BQ8TEW8 1205 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 KAT5Q92993 513 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 ATP6V0A1Q93050 837 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 SAAL1Q96ER3 474 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 CEP170P1Q96L14 293 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 KIFC3Q9BVG8 833 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 CTTNBP2NLQ9P2B4 639 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 AMACRQ9UHK6 382 aa8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 CNOT7Q9UIV1 285 aaKnown RBP8.98□□□□□ -0.97
SND1-IT1-201ENST00000623342 ZNF233A6NK53 670 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 SGPL1O95470 568 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 KRT14P02533 472 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 PSAPP07602 524 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 GZMAP12544 262 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 KCNA2P16389 499 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 PTPRAP18433 802 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 DSG3P32926 999 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 PRPF4BQ13523 1007 aaKnown RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 PPP2R5EQ16537 467 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 USP37Q86T82 979 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 PPM1KQ8N3J5 372 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 TMC2Q8TDI7 906 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 EPS8L1Q8TE68 723 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 BSNDQ8WZ55 320 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 ZKSCAN4Q969J2 545 aaPredicted RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 CCDC127Q96BQ5 260 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 LRRC45Q96CN5 670 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 C12orf42Q96LP6 360 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 RNPC3Q96LT9 517 aaKnown RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 KREMEN1Q96MU8 473 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 CAPS2Q9BXY5 557 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 TMEM8AQ9HCN3 771 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 NOCTQ9UK39 431 aaKnown RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 COQ4Q9Y3A0 265 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 ALG6Q9Y672 507 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 FAM170AA1A519 330 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 A6NNZ2 444 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 MIF4GDA9UHW6 222 aaKnown RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 TTI1O43156 1089 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 ZNF862O60290 1169 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 STBD1O95210 358 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 CHRNB2P17787 502 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 GTF2H1P32780 548 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 IRAK1P51617 712 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 GPC3P51654 580 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 SKOR1P84550 965 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 TUBB8Q3ZCM7 444 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 PRAMEF18Q5VWM3 479 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 NOP9Q86U38 636 aaKnown RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 DDX42Q86XP3 938 aaKnown RBP eCLIP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 PROCA1Q8NCQ7 364 aaPredicted RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 C1orf131Q8NDD1 294 aaKnown RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 MCPH1Q8NEM0 835 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 SEC14L1Q92503 715 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 SHC3Q92529 594 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 SEMA4DQ92854 862 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 CDHR1Q96JP9 859 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 MFSD14AQ96MC6 490 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 FBXL18Q96ME1 805 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 WRNIP1Q96S55 665 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 PCDHB18PQ96TA0 734 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 ZNF214Q9UL59 606 aaPredicted RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 ADAMTS5Q9UNA0 930 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 UTP11Q9Y3A2 253 aaKnown RBP8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 GJA3Q9Y6H8 435 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 NFASCO94856 1347 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 PHIPQ8WWQ0 1821 aa8.97□□□□□ -0.97
SND1-IT1-201ENST00000623342 GOLGA6L10A0A0M3HER8 536 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 C19orf81C9J6K1 198 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 CYP26A1O43174 497 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 PPFIA4O75335 1185 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms