RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SCLYQ96I15 445 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 TIGD1Q96MW7 591 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 TSNARE1Q96NA8 513 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 HINFPQ9BQA5 517 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 MRPL9Q9BYD2 267 aaKnown RBP9.77□□□□□ -0.84
HDAC9-229ENST00000622668 SEPT10Q9P0V9 454 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 ZNF214Q9UL59 606 aaPredicted RBP9.77□□□□□ -0.84
HDAC9-229ENST00000622668 TRIM49BA6NDI0 452 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 IFNB1P01574 187 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 CKMP06732 381 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 UQCRHP07919 91 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 DCAF4L1Q3SXM0 396 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 ACCSLQ4AC99 568 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 TEX35Q5T0J7 233 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 RESP18Q5W5W9 173 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 RWDD4Q6NW29 188 aaKnown RBP9.77□□□□□ -0.85
HDAC9-229ENST00000622668 PDZD4Q76G19 769 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-229ENST00000622668 PASD1Q8IV76 773 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 UBXN4Q92575 508 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 POLR3CQ9BUI4 534 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-229ENST00000622668 TRIM9Q9C026 710 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 RSAD1Q9HA92 442 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 RNF19AQ9NV58 838 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 HSPBP1Q9NZL4 362 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 DDX41Q9UJV9 622 aaKnown RBP9.77□□□□□ -0.85
HDAC9-229ENST00000622668 FBXL21Q9UKT6 434 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 ANKRD26Q9UPS8 1709 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 MOXD2PA6NHM9 499 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 CTDNEP1O95476 244 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 SLC4A1P02730 911 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 HMBSP08397 361 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 COPB1P53618 953 aaKnown RBP9.77□□□□□ -0.85
HDAC9-229ENST00000622668 RTP1P59025 263 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 IFFO1Q0D2I5 559 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 DNAJC24Q6P3W2 148 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 PPP1R21Q6ZMI0 780 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 C4orf19Q8IY42 314 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 DAGLBQ8NCG7 672 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 GAD1Q99259 594 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 TRPV6Q9H1D0 765 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 CYP4F11Q9HBI6 524 aa9.77□□□□□ -0.85
HDAC9-229ENST00000622668 CCND3P30281 292 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SNW1Q13573 536 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 KCNB1Q14721 858 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 MTFR1Q15390 333 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 PPP1R7Q15435 360 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 NAALADL2Q58DX5 795 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 FAM171A1Q5VUB5 890 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 RINT1Q6NUQ1 792 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 ERICH1Q86X53 443 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 OR8K1Q8NGG5 319 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SPON2Q9BUD6 331 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 KCND2Q9NZV8 630 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 USP20Q9Y2K6 914 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 PAXBP1Q9Y5B6 917 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 NWD2Q9ULI1 1742 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 M0QYV0 167 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 ATP2A1O14983 1001 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 H2AFZP0C0S5 128 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 NAMPTP43490 491 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 TAF6P49848 677 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 RAB27AP51159 221 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 ELAVL2Q12926 359 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 RRP1BQ14684 758 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 H2AFVQ71UI9 128 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 UBL4BQ8N7F7 174 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 RIN2Q8WYP3 895 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 BHMTQ93088 406 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 EXOC4Q96A65 974 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 CAPZA3Q96KX2 299 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 ZNF558Q96NG5 402 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SLITRK1Q96PX8 696 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 PSMB7Q99436 277 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 CELF4Q9BZC1 486 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 PDE11AQ9HCR9 933 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SNTG2Q9NY99 539 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 LSM7Q9UK45 103 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 RGPD2P0DJD1 1756 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 MYMKA6NI61 221 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 RALAP11233 206 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SELPP16109 830 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SMPD1P17405 629 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 ERCC5P28715 1186 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 NPTX2P47972 431 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 MRPS6P82932 125 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SV2CQ496J9 727 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 ARHGAP15Q53QZ3 475 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SH3D19Q5HYK7 790 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SRGAP1Q7Z6B7 1085 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 RABGGTAQ92696 567 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 ZIC5Q96T25 663 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 XPO4Q9C0E2 1151 aaKnown RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 SIK2Q9H0K1 926 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 FAM49BQ9NUQ9 324 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 TMEM63CQ9P1W3 806 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 MOSPD1Q9UJG1 213 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 EMSYQ7Z589 1322 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-229ENST00000622668 MEIS2O14770 477 aa9.76□□□□□ -0.85
HDAC9-229ENST00000622668 TOM1L1O75674 476 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms