RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 CUL1Q13616 776 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 SNRNP48Q6IEG0 339 aaKnown RBP12.93□□□□□ -0.34
TP53-227ENST00000622645 AADACL2Q6P093 401 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 NOP9Q86U38 636 aaKnown RBP12.93□□□□□ -0.34
TP53-227ENST00000622645 NLRX1Q86UT6 975 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 CEP170P1Q96L14 293 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 IWS1Q96ST2 819 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 TIPINQ9BVW5 301 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 DAAM1Q9Y4D1 1078 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 GJA3Q9Y6H8 435 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 FER1L6Q2WGJ9 1857 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 TMEM110-MUSTN1A8MSY1 372 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
TP53-227ENST00000622645 RGS20O76081 388 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 CHRNB2P17787 502 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 HSPA9P38646 679 aaKnown RBP12.92□□□□□ -0.34
TP53-227ENST00000622645 ATP1A2P50993 1020 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 HMGCS2P54868 508 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 EPS8L1Q8TE68 723 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 PARD3BQ8TEW8 1205 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 FAM84AQ96KN4 292 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 KMT5AQ9NQR1 393 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 PLAAQ9Y263 795 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 LOXHD1Q8IVV2 1947 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 PFASO15067 1338 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 POU5F1Q01860 360 aaKnown RBP12.92□□□□□ -0.34
TP53-227ENST00000622645 SWSAP1Q6NVH7 229 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 SLC39A4Q6P5W5 647 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 MAATS1Q7Z4T9 603 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 MAP4K3Q8IVH8 894 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 RHOT2Q8IXI1 618 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 FAM71AQ8IYT1 594 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 SAMD3Q8N6K7 520 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 CCDC26Q8TAB7 109 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 KRT35Q92764 455 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 TRIM31Q9BZY9 425 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 DPH5Q9H2P9 285 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 SLITRK6Q9H5Y7 841 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 ERVK-5Q9HDB9 667 aa12.92□□□□□ -0.34
TP53-227ENST00000622645 CNOT7Q9UIV1 285 aaKnown RBP12.92□□□□□ -0.34
TP53-227ENST00000622645 NOCTQ9UK39 431 aaKnown RBP12.92□□□□□ -0.34
TP53-227ENST00000622645 TTC7AQ9ULT0 858 aaPredicted RBP12.92□□□□□ -0.34
TP53-227ENST00000622645 BHMG1C9JSJ3 638 aaPredicted RBP12.91□□□□□ -0.34
TP53-227ENST00000622645 MAPK13O15264 365 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 CCND2P30279 289 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 HSD17B3P37058 310 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 MARCKSL1P49006 195 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 GNGT1P63211 74 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 CEP85LQ5SZL2 805 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 KRT39Q6A163 491 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 OR2W6PQ8NHA6 318 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 TAS1R2Q8TE23 839 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 WRNIP1Q96S55 665 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 TRIM51Q9BSJ1 452 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 CARD9Q9H257 536 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 EXOC7Q9UPT5 735 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 ADGRA3Q8IWK6 1321 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 PPFIA4O75335 1185 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 MMEP08473 750 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 PTPRAP18433 802 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 SNRPFP62306 86 aaKnown RBP12.91□□□□□ -0.34
TP53-227ENST00000622645 GPC5P78333 572 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 UAP1Q16222 522 aaPredicted RBP12.91□□□□□ -0.34
TP53-227ENST00000622645 SCYL3Q8IZE3 742 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 EIF1ADQ8N9N8 165 aaKnown RBP12.91□□□□□ -0.34
TP53-227ENST00000622645 ZNF280CQ8ND82 737 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.91□□□□□ -0.34
TP53-227ENST00000622645 POMGNT1Q8WZA1 660 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 GINM1Q9NU53 330 aa12.91□□□□□ -0.34
TP53-227ENST00000622645 STBD1O95210 358 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
TP53-227ENST00000622645 KCNA2P16389 499 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 MESDQ14696 234 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 REPS2Q8NFH8 660 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 HELQQ8TDG4 1101 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 DHX38Q92620 1227 aaKnown RBP12.9□□□□□ -0.34
TP53-227ENST00000622645 GLG1Q92896 1179 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 GPRASP2Q96D09 838 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 NTPCRQ9BSD7 190 aaKnown RBP12.9□□□□□ -0.34
TP53-227ENST00000622645 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
TP53-227ENST00000622645 USP20Q9Y2K6 914 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 GRIN2DO15399 1336 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 ANKRD65E5RJM6 399 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 RTN2O75298 545 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 TGFB2P61812 414 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 FMO1Q01740 532 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 PDCLQ13371 301 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 TMEM132BQ14DG7 1078 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 OTUD6AQ7L8S5 288 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 SRLQ86TD4 932 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 CPNE8Q86YQ8 564 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 CD302Q8IX05 232 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 SLC17A8Q8NDX2 589 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 SLC16A10Q8TF71 515 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 SHC3Q92529 594 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 BTBD6Q96KE9 485 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 CENPHQ9H3R5 247 aa12.9□□□□□ -0.34
TP53-227ENST00000622645 UTP11Q9Y3A2 253 aaKnown RBP12.9□□□□□ -0.34
TP53-227ENST00000622645 RRP15Q9Y3B9 282 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms