RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 SLC7A5Q01650 507 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 SLC9C1Q4G0N8 1177 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 OLFML2BQ68BL8 750 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 B3GNT9Q6UX72 402 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 TAS1R3Q7RTX0 852 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 ZNF571Q7Z3V5 609 aaPredicted RBP11.43□□□□□ -0.58
VPS11-208ENST00000621676 TAB3Q8N5C8 712 aaPredicted RBP11.43□□□□□ -0.58
VPS11-208ENST00000621676 MTMR12Q9C0I1 747 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 PTPRJQ12913 1337 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 CYLC1P35663 651 aaPredicted RBP11.42□□□□□ -0.58
VPS11-208ENST00000621676 SV2AQ7L0J3 742 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 SLC47A2Q86VL8 602 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 KIAA0319LQ8IZA0 1049 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 PSPC1Q8WXF1 523 aaKnown RBP11.42□□□□□ -0.58
VPS11-208ENST00000621676 MAML3Q96JK9 1138 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 PARK7Q99497 189 aaKnown RBP11.42□□□□□ -0.58
VPS11-208ENST00000621676 FAM118BQ9BPY3 351 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 INTS2Q9H0H0 1204 aaKnown RBP11.42□□□□□ -0.58
VPS11-208ENST00000621676 PCDHA13Q9Y5I0 950 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 MYH11P35749 1972 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 SLC25A27O95847 323 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 CST3P01034 146 aaPredicted RBP11.42□□□□□ -0.58
VPS11-208ENST00000621676 CXCL8P10145 99 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 CBX1P83916 185 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 ZNF568Q3ZCX4 644 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 MMS19Q96T76 1030 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 TMEM117Q9H0C3 514 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 RBAKQ9NYW8 714 aaPredicted RBP11.42□□□□□ -0.58
VPS11-208ENST00000621676 SGPL1O95470 568 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 CFHP08603 1231 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 CD19P15391 556 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 FAM193AP78312 1265 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 ZNF211Q13398 564 aaPredicted RBP11.42□□□□□ -0.58
VPS11-208ENST00000621676 KLHDC7AQ5VTJ3 777 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 DNERQ8NFT8 737 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 CPA5Q8WXQ8 436 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 UBXN4Q92575 508 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 PRDM10Q9NQV6 1147 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 OLFML3Q9NRN5 406 aa11.42□□□□□ -0.58
VPS11-208ENST00000621676 GUCY2CP25092 1073 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 RABGGTBP53611 331 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 OAZ1P54368 228 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 PPFIA1Q13136 1202 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 FAM160B1Q5W0V3 765 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 EPM2AIP1Q7L775 607 aaPredicted RBP11.41□□□□□ -0.58
VPS11-208ENST00000621676 BAP1Q92560 729 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 PANX2Q96RD6 677 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 LPIN3Q9BQK8 851 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 TRIM31Q9BZY9 425 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 SYNPO2Q9UMS6 1093 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 TREHO43280 583 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 FDX1P10109 184 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 PRKCZQ05513 592 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 ALKBH5Q6P6C2 394 aaKnown RBP11.41□□□□□ -0.58
VPS11-208ENST00000621676 PDXDC1Q6P996 788 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 TMEM270Q6UE05 265 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 SMAP1Q8IYB5 467 aaPredicted RBP11.41□□□□□ -0.58
VPS11-208ENST00000621676 GOLGA2P5Q9HBQ8 144 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 TRAF3IP3Q9Y228 551 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 USTQ9Y2C2 406 aa11.41□□□□□ -0.58
VPS11-208ENST00000621676 LRRIQ3A6PVS8 624 aaPredicted RBP11.4□□□□□ -0.58
VPS11-208ENST00000621676 PRKCBP05771 671 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 TMOD1P28289 359 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 STAT1P42224 750 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 PIK3CAP42336 1068 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 ATN1P54259 1190 aaPredicted RBP11.4□□□□□ -0.58
VPS11-208ENST00000621676 MAPK6Q16659 721 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 AADACL2Q6P093 401 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 COG1Q8WTW3 980 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 IWS1Q96ST2 819 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 OSBPL7Q9BZF2 842 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 MROH8Q9H579 483 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 ODF2LQ9ULJ1 636 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 DLEC1Q9Y238 1755 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 EVPLQ92817 2033 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 FRMD3A2A2Y4 597 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 CTAGE9A4FU28 777 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 HCRTO43612 131 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 TNFAIP3P21580 790 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 ACSF2Q96CM8 615 aaPredicted RBP11.4□□□□□ -0.58
VPS11-208ENST00000621676 TRIM6Q9C030 488 aaPredicted RBP11.4□□□□□ -0.58
VPS11-208ENST00000621676 ST7Q9NRC1 585 aa11.4□□□□□ -0.58
VPS11-208ENST00000621676 ZNF233A6NK53 670 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 STBD1O95210 358 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 IGFBP6P24592 240 aaPredicted RBP11.4□□□□□ -0.59
VPS11-208ENST00000621676 C2orf54Q08AI8 447 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 TAPT1Q6NXT6 567 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 TLK2Q86UE8 772 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 RASAL3Q86YV0 1011 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 MCPH1Q8NEM0 835 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 HASPINQ8TF76 798 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 ZNF516Q92618 1163 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 ERGIC2Q96RQ1 377 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 TRIM7Q9C029 511 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 FOCADQ5VW36 1801 aa11.4□□□□□ -0.59
VPS11-208ENST00000621676 ESYT3A0FGR9 886 aa11.39□□□□□ -0.59
VPS11-208ENST00000621676 PALMO75781 387 aa11.39□□□□□ -0.59
VPS11-208ENST00000621676 KCNA4P22459 653 aa11.39□□□□□ -0.59
VPS11-208ENST00000621676 ARHGAP25P42331 645 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms