RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 IMPACTQ9P2X3 320 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 THSD7BQ9C0I4 1608 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 GRIN2DO15399 1336 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 PHLPP2Q6ZVD8 1323 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 TTC26A0AVF1 554 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 C17orf102A2RUQ5 167 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 RRN3P2A6NIE6 340 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 SLC16A3O15427 465 aaKnown RBP17.36■□□□□ 0.37
CBWD3-216ENST00000621396 ACTN1P12814 892 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 TRIM21P19474 475 aaKnown RBP17.36■□□□□ 0.37
CBWD3-216ENST00000621396 SFPQP23246 707 aaKnown RBP eCLIP17.36■□□□□ 0.37
CBWD3-216ENST00000621396 OSTNP61366 133 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 TFDP1Q14186 410 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 NFIL3Q16649 462 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 TMEM132AQ24JP5 1023 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 LMBRD2Q68DH5 695 aaPredicted RBP17.36■□□□□ 0.37
CBWD3-216ENST00000621396 LHX8Q68G74 356 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 CCSAPQ6IQ19 270 aaPredicted RBP17.36■□□□□ 0.37
CBWD3-216ENST00000621396 GDF6Q6KF10 455 aaPredicted RBP17.36■□□□□ 0.37
CBWD3-216ENST00000621396 WNT8BQ93098 351 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 KATNAL1Q9BW62 490 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 UPF3AQ9H1J1 476 aaKnown RBP17.36■□□□□ 0.37
CBWD3-216ENST00000621396 TMEM134Q9H6X4 195 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 MBLAC1A4D2B0 266 aaPredicted RBP17.35■□□□□ 0.37
CBWD3-216ENST00000621396 H0YCG3 227 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 SLC9A1P19634 815 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 TNFSF9P41273 254 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 BFSP1Q12934 665 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 PPFIBP1Q86W92 1011 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 DNAJC5GQ8N7S2 189 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 CEP120Q8N960 986 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 SLAIN1Q8ND83 568 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 KLHDC9Q8NEP7 349 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 TOPORSQ9NS56 1045 aaPredicted RBP17.35■□□□□ 0.37
CBWD3-216ENST00000621396 DLATP10515 647 aaKnown RBP17.35■□□□□ 0.37
CBWD3-216ENST00000621396 EFNA5P52803 228 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 EEF1DP3Q658K8 133 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 TMEM40Q8WWA1 233 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 ACO2Q99798 780 aaKnown RBP17.35■□□□□ 0.37
CBWD3-216ENST00000621396 MSTO1Q9BUK6 570 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 KCNG1Q9UIX4 513 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 AGO2Q9UKV8 859 aaKnown RBP17.35■□□□□ 0.37
CBWD3-216ENST00000621396 SIK3Q9Y2K2 1263 aa17.35■□□□□ 0.37
CBWD3-216ENST00000621396 CLDN3O15551 220 aa17.34■□□□□ 0.37
CBWD3-216ENST00000621396 AFPP02771 609 aaKnown RBP17.34■□□□□ 0.37
CBWD3-216ENST00000621396 GCLMP48507 274 aa17.34■□□□□ 0.37
CBWD3-216ENST00000621396 PPP3CAQ08209 521 aa17.34■□□□□ 0.37
CBWD3-216ENST00000621396 PRPF4BQ13523 1007 aaKnown RBP17.34■□□□□ 0.37
CBWD3-216ENST00000621396 C12orf56Q8IXR9 622 aa17.34■□□□□ 0.37
CBWD3-216ENST00000621396 UNC93B1Q9H1C4 597 aa17.34■□□□□ 0.37
CBWD3-216ENST00000621396 FZD8Q9H461 694 aa17.34■□□□□ 0.37
CBWD3-216ENST00000621396 METTL14Q9HCE5 456 aaKnown RBP17.34■□□□□ 0.37
CBWD3-216ENST00000621396 ASAP2O43150 1006 aa17.33■□□□□ 0.37
CBWD3-216ENST00000621396 VAMP7P51809 220 aa17.33■□□□□ 0.37
CBWD3-216ENST00000621396 C1orf220Q5T0J3 134 aa17.33■□□□□ 0.37
CBWD3-216ENST00000621396 CRELD2Q6UXH1 353 aaPredicted RBP17.33■□□□□ 0.37
CBWD3-216ENST00000621396 ERGIC2Q96RQ1 377 aa17.33■□□□□ 0.37
CBWD3-216ENST00000621396 MKNK1Q9BUB5 465 aa17.33■□□□□ 0.37
CBWD3-216ENST00000621396 MRPL4Q9BYD3 311 aaKnown RBP17.33■□□□□ 0.37
CBWD3-216ENST00000621396 GTF2IRD1Q9UHL9 959 aa17.33■□□□□ 0.37
CBWD3-216ENST00000621396 A0A1W2PQC6 194 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 GPR32O75388 356 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 SKILP12757 684 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 PHKA2P46019 1235 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 CCZ1BP86790 482 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 CCZ1P86791 482 aaPredicted RBP17.33■□□□□ 0.36
CBWD3-216ENST00000621396 ARHGEF6Q15052 776 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 RNF180Q86T96 592 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 THNSL1Q8IYQ7 743 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 GPD1LQ8N335 351 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 NLRC4Q9NPP4 1024 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 ZKSCAN5Q9Y2L8 839 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 PTPN22Q9Y2R2 807 aa17.33■□□□□ 0.36
CBWD3-216ENST00000621396 A0A0B4J269 797 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 AKR1B15C9JRZ8 316 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-216ENST00000621396 ACKR2O00590 384 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 CTSHP09668 335 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 KRT13P13646 458 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 GSDMDP57764 484 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 AMHR2Q16671 573 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 ATF7IP2Q5U623 682 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 TMEM192Q8IY95 271 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 FAM212AQ96EL1 285 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 C2orf40Q9H1Z8 148 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 ADAMTS10Q9H324 1103 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 TRMT13Q9NUP7 481 aaKnown RBP17.32■□□□□ 0.36
CBWD3-216ENST00000621396 SMIM35A0A1B0GVV1 85 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 ZEB2O60315 1214 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 TOM1L1O75674 476 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 ARF4P18085 180 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-216ENST00000621396 GARTP22102 1010 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 KRT9P35527 623 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 ACLYP53396 1101 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 SCARA3Q6AZY7 606 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 GJB7Q6PEY0 223 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 LSM14BQ9BX40 385 aaKnown RBP17.32■□□□□ 0.36
CBWD3-216ENST00000621396 PDE11AQ9HCR9 933 aa17.32■□□□□ 0.36
CBWD3-216ENST00000621396 CGNQ9P2M7 1197 aaKnown RBP17.32■□□□□ 0.36
CBWD3-216ENST00000621396 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.32■□□□□ 0.36
CBWD3-216ENST00000621396 ITIH6Q6UXX5 1313 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms