RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PCDHB2Q9Y5E7 798 aa17.85■□□□□ 0.45
CD40-207ENST00000620709 A0A087WWV3 80 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 WNT7AO00755 349 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 CUTAO60888 179 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 ERLIN2O94905 339 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 CXCL14O95715 111 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 LIG1P18858 919 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 BMS1Q14692 1282 aaKnown RBP17.84■□□□□ 0.45
CD40-207ENST00000620709 ZSCAN23Q3MJ62 389 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 CCDC73Q6ZRK6 1079 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 KRI1Q8N9T8 703 aaKnown RBP17.84■□□□□ 0.45
CD40-207ENST00000620709 URGCPQ8TCY9 931 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 TBC1D13Q9NVG8 400 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 ARID2Q68CP9 1835 aa17.84■□□□□ 0.45
CD40-207ENST00000620709 PRR33A8MZF0 331 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 ASAP2O43150 1006 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 GAS2O43903 313 aaKnown RBP17.83■□□□□ 0.45
CD40-207ENST00000620709 OFD1O75665 1012 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 MCM7P33993 719 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 GSE1Q14687 1217 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 AXDND1Q5T1B0 1012 aaPredicted RBP17.83■□□□□ 0.45
CD40-207ENST00000620709 VPS52Q8N1B4 723 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 FSIP1Q8NA03 581 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 AUTS2Q8WXX7 1259 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 TRAIPQ9BWF2 469 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 NRDE2Q9H7Z3 1164 aa17.83■□□□□ 0.45
CD40-207ENST00000620709 DDX19AQ9NUU7 478 aaKnown RBP17.83■□□□□ 0.45
CD40-207ENST00000620709 TRIOO75962 3097 aa17.83■□□□□ 0.44
CD40-207ENST00000620709 ZNF174Q15697 407 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 ANKRD54Q6NXT1 300 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 TMEM173Q86WV6 379 aaPredicted RBP17.82■□□□□ 0.44
CD40-207ENST00000620709 MRPL43Q8N983 215 aaKnown RBP17.82■□□□□ 0.44
CD40-207ENST00000620709 PIGOQ8TEQ8 1089 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 FAM193BQ96PV7 902 aaPredicted RBP17.82■□□□□ 0.44
CD40-207ENST00000620709 DNAJB4Q9UDY4 337 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.82■□□□□ 0.44
CD40-207ENST00000620709 C2orf71A6NGG8 1288 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 POTEMA6NI47 508 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 INO80B-WBP1J3KQ70 363 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 ZNF623O75123 536 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 SP100P23497 879 aaPredicted RBP17.82■□□□□ 0.44
CD40-207ENST00000620709 CMA1P23946 247 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 PLA2G5P39877 138 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 TFDP1Q14186 410 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 MAEAQ7L5Y9 396 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 CPB2Q96IY4 423 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 PHF7Q9BWX1 381 aaPredicted RBP17.82■□□□□ 0.44
CD40-207ENST00000620709 TMEM60Q9H2L4 133 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 RSAD1Q9HA92 442 aa17.82■□□□□ 0.44
CD40-207ENST00000620709 FBXO2Q9UK22 296 aaPredicted RBP17.82■□□□□ 0.44
CD40-207ENST00000620709 POMCP01189 267 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 GALTP07902 379 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 HOXA11P31270 313 aaPredicted RBP17.81■□□□□ 0.44
CD40-207ENST00000620709 SLC11A1P49279 550 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 ATP2C1P98194 919 aaPredicted RBP17.81■□□□□ 0.44
CD40-207ENST00000620709 FAM160A1Q05DH4 1040 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 NCBP1Q09161 790 aaKnown RBP17.81■□□□□ 0.44
CD40-207ENST00000620709 ORC2Q13416 577 aaPredicted RBP17.81■□□□□ 0.44
CD40-207ENST00000620709 MXD4Q14582 209 aaPredicted RBP17.81■□□□□ 0.44
CD40-207ENST00000620709 AGMOQ6ZNB7 445 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 ZNF280BQ86YH2 543 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 CASP10Q92851 521 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 HSD17B14Q9BPX1 270 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 APOL6Q9BWW8 343 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 GOLPH3LQ9H4A5 285 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 XPNPEP1Q9NQW7 623 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 ANKEF1Q9NU02 776 aa17.81■□□□□ 0.44
CD40-207ENST00000620709 SRPRBQ9Y5M8 271 aaKnown RBP17.81■□□□□ 0.44
CD40-207ENST00000620709 USO1O60763 962 aaKnown RBP17.8■□□□□ 0.44
CD40-207ENST00000620709 CLASP2O75122 1294 aaKnown RBP17.8■□□□□ 0.44
CD40-207ENST00000620709 NR1I2O75469 434 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 LETM1O95202 739 aaPredicted RBP17.8■□□□□ 0.44
CD40-207ENST00000620709 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
CD40-207ENST00000620709 ITGA4P13612 1032 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 ZNF445P59923 1031 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 CBX2Q14781 532 aaPredicted RBP17.8■□□□□ 0.44
CD40-207ENST00000620709 UBXN11Q5T124 520 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 SYCE2Q6PIF2 218 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 ASAP3Q8TDY4 903 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 BCL7CQ8WUZ0 217 aaPredicted RBP17.8■□□□□ 0.44
CD40-207ENST00000620709 RSPH1Q8WYR4 309 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 IGSF21Q96ID5 467 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 MTMR9Q96QG7 549 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 NUP62CLQ9H1M0 184 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 HCFC2Q9Y5Z7 792 aa17.8■□□□□ 0.44
CD40-207ENST00000620709 LOC730098B7Z3J9 87 aa17.79■□□□□ 0.44
CD40-207ENST00000620709 TSPAN1O60635 241 aa17.79■□□□□ 0.44
CD40-207ENST00000620709 DGAT1O75907 488 aa17.79■□□□□ 0.44
CD40-207ENST00000620709 AFF1P51825 1210 aaKnown RBP17.79■□□□□ 0.44
CD40-207ENST00000620709 PTENP60484 403 aa17.79■□□□□ 0.44
CD40-207ENST00000620709 PTGDRQ13258 359 aa17.79■□□□□ 0.44
CD40-207ENST00000620709 CAPSQ13938 189 aa17.79■□□□□ 0.44
CD40-207ENST00000620709 KCNC3Q14003 757 aa17.79■□□□□ 0.44
CD40-207ENST00000620709 HERC4Q5GLZ8 1057 aaPredicted RBP17.79■□□□□ 0.44
CD40-207ENST00000620709 TMEM184AQ6ZMB5 413 aa17.79■□□□□ 0.44
CD40-207ENST00000620709 MRPL10Q7Z7H8 261 aaKnown RBP17.79■□□□□ 0.44
CD40-207ENST00000620709 DDX53Q86TM3 631 aaKnown RBP17.79■□□□□ 0.44
CD40-207ENST00000620709 EIF2AQ9BY44 585 aaKnown RBP17.79■□□□□ 0.44
CD40-207ENST00000620709 TRIM6Q9C030 488 aaPredicted RBP17.79■□□□□ 0.44
CD40-207ENST00000620709 ZBP1Q9H171 429 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms