RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 PDCD2LQ9BRP1 358 aa12.09□□□□□ -0.47
TP53-223ENST00000618944 TMBIM4Q9HC24 238 aa12.09□□□□□ -0.47
TP53-223ENST00000618944 LRRC4CQ9HCJ2 640 aa12.09□□□□□ -0.47
TP53-223ENST00000618944 TBX20Q9UMR3 447 aa12.09□□□□□ -0.47
TP53-223ENST00000618944 ATP8B3O60423 1300 aa12.09□□□□□ -0.47
TP53-223ENST00000618944 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.48
TP53-223ENST00000618944 NDUFAB1O14561 156 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 COMTP21964 271 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 CNGA1P29973 690 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 SEC24CP53992 1094 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 ALCAMQ13740 583 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 KDM7AQ6ZMT4 941 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 ANO5Q75V66 913 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 FMNL3Q8IVF7 1028 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 RHOT2Q8IXI1 618 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 C4orf19Q8IY42 314 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 KIAA1683Q9H0B3 1180 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 CARD9Q9H257 536 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 PXMP2Q9NR77 195 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 USP20Q9Y2K6 914 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 ATP8A1Q9Y2Q0 1164 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 SNX24Q9Y343 169 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 WDR64B1ANS9 1081 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 MYO1FO00160 1098 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 ZBED4O75132 1171 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 RFX1P22670 979 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 LSP1P33241 339 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 ODF2Q5BJF6 829 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 PRAMEF18Q5VWM3 479 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 C12orf56Q8IXR9 622 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 EIF1ADQ8N9N8 165 aaKnown RBP12.08□□□□□ -0.48
TP53-223ENST00000618944 TMEM161BQ8NDZ6 487 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 EPS8L1Q8TE68 723 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.08□□□□□ -0.48
TP53-223ENST00000618944 BSNDQ8WZ55 320 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 DHX38Q92620 1227 aaKnown RBP12.08□□□□□ -0.48
TP53-223ENST00000618944 LPAR1Q92633 364 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 C18orf8Q96DM3 657 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 ATG4CQ96DT6 458 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 TEPSINQ96N21 525 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 CAMKK2Q96RR4 588 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 FAM107BQ9H098 131 aa12.08□□□□□ -0.48
TP53-223ENST00000618944 TTC7AQ9ULT0 858 aaPredicted RBP12.08□□□□□ -0.48
TP53-223ENST00000618944 GOLGA6L10A0A0M3HER8 536 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 HMGB1P1B2RPK0 211 aaPredicted RBP12.07□□□□□ -0.48
TP53-223ENST00000618944 P4HA2O15460 535 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 RTN2O75298 545 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 LYPLA2O95372 231 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 DLATP10515 647 aaKnown RBP12.07□□□□□ -0.48
TP53-223ENST00000618944 SMTNP53814 917 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 NCKAP1LP55160 1127 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 CORO7P57737 925 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 PTENP60484 403 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 CIAPIN1Q6FI81 312 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 TMC3Q7Z5M5 1100 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 FAM71AQ8IYT1 594 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 TAS1R2Q8TE23 839 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 ZBED3Q96IU2 234 aaPredicted RBP12.07□□□□□ -0.48
TP53-223ENST00000618944 CEP170P1Q96L14 293 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 PI4K2AQ9BTU6 479 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 KMT5AQ9NQR1 393 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 GABBR1Q9UBS5 961 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 DAAM1Q9Y4D1 1078 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 PLTPP55058 493 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 MFAP3P55082 362 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 DMP1Q13316 513 aaPredicted RBP12.07□□□□□ -0.48
TP53-223ENST00000618944 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
TP53-223ENST00000618944 SWSAP1Q6NVH7 229 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 LRIG3Q6UXM1 1119 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 NLRX1Q86UT6 975 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 ZDHHC14Q8IZN3 488 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 ATP8B4Q8TF62 1192 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 TATDN2Q93075 761 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 PPANQ9NQ55 473 aaKnown RBP12.07□□□□□ -0.48
TP53-223ENST00000618944 FAM114A2Q9NRY5 505 aa12.07□□□□□ -0.48
TP53-223ENST00000618944 NOCTQ9UK39 431 aaKnown RBP12.07□□□□□ -0.48
TP53-223ENST00000618944 NOVA2Q9UNW9 492 aaKnown RBP12.07□□□□□ -0.48
TP53-223ENST00000618944 DIS3Q9Y2L1 958 aaKnown RBP12.07□□□□□ -0.48
TP53-223ENST00000618944 TCRBV7S2A1N4TA0A589 114 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 DCDC2CA8MYV0 355 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 VWA5AO00534 786 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 PYGMP11217 842 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 TMOD1P28289 359 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 MDH1P40925 334 aaKnown RBP12.06□□□□□ -0.48
TP53-223ENST00000618944 JAK3P52333 1124 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 FMO1Q01740 532 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 KRT39Q6A163 491 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 UBL4BQ8N7F7 174 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 PARD3BQ8TEW8 1205 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 ZKSCAN4Q969J2 545 aaPredicted RBP12.06□□□□□ -0.48
TP53-223ENST00000618944 MAGOHBQ96A72 148 aaKnown RBP12.06□□□□□ -0.48
TP53-223ENST00000618944 IWS1Q96ST2 819 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 NAP1L3Q99457 506 aaPredicted RBP12.06□□□□□ -0.48
TP53-223ENST00000618944 FMO2Q99518 471 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 ERP44Q9BS26 406 aa12.06□□□□□ -0.48
TP53-223ENST00000618944 NUP85Q9BW27 656 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms