RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ERICH2A1L162 156 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 FAM170BA6NMN3 283 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 XYLBO75191 536 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 CAPNS1P04632 268 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 LIFRP42702 1097 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 RBM25P49756 843 aaKnown RBP5.18□□□□□ -1.58
SNCA-213ENST00000618500 ADCY1Q08828 1119 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 TMEM62Q0P6H9 643 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 KIZQ2M2Z5 673 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 DGKKQ5KSL6 1271 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 USP17L6PQ6QN14 398 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 MB21D2Q8IYB1 491 aaPredicted RBP5.18□□□□□ -1.58
SNCA-213ENST00000618500 TMEM87AQ8NBN3 555 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 LEMD2Q8NC56 503 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 RSAD2Q8WXG1 361 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 TMEM87BQ96K49 555 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 NFKBIZQ9BYH8 718 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 NRBP2Q9NSY0 501 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 WDFY4Q6ZS81 3184 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 DCDC2BA2VCK2 349 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 K7ESF4 209 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 ALDH2P05091 517 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 WEE2P0C1S8 567 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 FCARP24071 287 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 B3GNT9Q6UX72 402 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 CTCFLQ8NI51 663 aaPredicted RBP5.17□□□□□ -1.58
SNCA-213ENST00000618500 OTUD7AQ8TE49 926 aaPredicted RBP5.17□□□□□ -1.58
SNCA-213ENST00000618500 PIK3R5Q8WYR1 880 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 RIT2Q99578 217 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 PHF20Q9BVI0 1012 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 COLEC11Q9BWP8 271 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 C8orf33Q9H7E9 229 aaPredicted RBP5.17□□□□□ -1.58
SNCA-213ENST00000618500 RBM28Q9NW13 759 aaKnown RBP5.17□□□□□ -1.58
SNCA-213ENST00000618500 ZMIZ1Q9ULJ6 1067 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 FAN1Q9Y2M0 1017 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 GIT1Q9Y2X7 761 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 PCDHA10Q9Y5I2 948 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 TSC2P49815 1807 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 WDR64B1ANS9 1081 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 NRP1O14786 923 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 ZC3H11AO75152 810 aaKnown RBP eCLIP5.17□□□□□ -1.58
SNCA-213ENST00000618500 STBD1O95210 358 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 KCNK5O95279 499 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 SP100P23497 879 aaPredicted RBP5.17□□□□□ -1.58
SNCA-213ENST00000618500 DPP6P42658 865 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 UBXN11Q5T124 520 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 EFCAB12Q6NXP0 572 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 TMTC3Q6ZXV5 915 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 NCOA7Q8NI08 942 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 CHMP4CQ96CF2 233 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 ZBTB10Q96DT7 871 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 ANO3Q9BYT9 981 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 RSAD1Q9HA92 442 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 VPS45Q9NRW7 570 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 OBP2AQ9NY56 170 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 ANKFY1Q9P2R3 1169 aa5.17□□□□□ -1.58
SNCA-213ENST00000618500 TK2O00142 265 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 ARNTLO00327 626 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 TGM5O43548 720 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 MAFO75444 373 aaPredicted RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 VTNP04004 478 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 NLRP11P59045 1033 aaKnown RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 ELAVL2Q12926 359 aaKnown RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 TRDNQ13061 729 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 MTAPQ13126 283 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 USP41Q3LFD5 358 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 PRSS36Q5K4E3 855 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 SPECC1Q5M775 1068 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 IL31Q6EBC2 164 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 KANK3Q6NY19 840 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 PARM1Q6UWI2 310 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 AGMOQ6ZNB7 445 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 SGMS1Q86VZ5 419 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 HOMER1Q86YM7 354 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 MAP4K3Q8IVH8 894 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 ZNF654Q8IZM8 581 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 GAB3Q8WWW8 586 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 FGF14Q92915 247 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 BACE2Q9Y5Z0 518 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 OBSL1O75147 1896 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 HELZP42694 1942 aaKnown RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 ASAP2O43150 1006 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 NR1I2O75469 434 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 DDHD2O94830 711 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 CSPG5O95196 566 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 RFC5P40937 340 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 EPHA5P54756 1037 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 GPC5P78333 572 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 SPEM2Q0P670 501 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 GRIK3Q13003 919 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 RAB33AQ14088 237 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 KARSQ15046 597 aaKnown RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 MOXD1Q6UVY6 613 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 TPRG1Q6ZUI0 275 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 GET4Q7L5D6 327 aaPredicted RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 SRBD1Q8N5C6 995 aaKnown RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 LSM14AQ8ND56 463 aaKnown RBP5.16□□□□□ -1.58
SNCA-213ENST00000618500 CNTNAP5Q8WYK1 1306 aa5.16□□□□□ -1.58
SNCA-213ENST00000618500 MS4A3Q96HJ5 214 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms