RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 FOXR2Q6PJQ5 311 aa17.78■□□□□ 0.44
SNAP47-213ENST00000617596 ZC3H3Q8IXZ2 948 aaKnown RBP17.78■□□□□ 0.44
SNAP47-213ENST00000617596 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
SNAP47-213ENST00000617596 SAAL1Q96ER3 474 aa17.78■□□□□ 0.44
SNAP47-213ENST00000617596 ZNF830Q96NB3 372 aaPredicted RBP17.78■□□□□ 0.44
SNAP47-213ENST00000617596 HAPLN2Q9GZV7 340 aa17.78■□□□□ 0.44
SNAP47-213ENST00000617596 C2orf40Q9H1Z8 148 aa17.78■□□□□ 0.44
SNAP47-213ENST00000617596 KCNF1Q9H3M0 494 aa17.78■□□□□ 0.44
SNAP47-213ENST00000617596 INTS13Q9NVM9 706 aa17.78■□□□□ 0.44
SNAP47-213ENST00000617596 ANKFY1Q9P2R3 1169 aa17.78■□□□□ 0.44
SNAP47-213ENST00000617596 PHF24Q9UPV7 400 aa17.78■□□□□ 0.44
SNAP47-213ENST00000617596 CTSHP09668 335 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 CCDC40Q4G0X9 1142 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.77■□□□□ 0.44
SNAP47-213ENST00000617596 FILIP1Q7Z7B0 1213 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 SESTD1Q86VW0 696 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 TMEM40Q8WWA1 233 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 POMGNT1Q8WZA1 660 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 CEP63Q96MT8 703 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 TRPV6Q9H1D0 765 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 FZD8Q9H461 694 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 DMAC2Q9NW81 257 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 HSPBP1Q9NZL4 362 aa17.77■□□□□ 0.44
SNAP47-213ENST00000617596 LIMA1Q9UHB6 759 aaKnown RBP17.77■□□□□ 0.44
SNAP47-213ENST00000617596 PES1O00541 588 aaKnown RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 TEX33O43247 280 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 EXOC3O60645 756 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 TFRCP02786 760 aaKnown RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 HARSP12081 509 aaKnown RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 RPL13P26373 211 aaKnown RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 MTIF2P46199 727 aaKnown RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 PDE4CQ08493 712 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 ZNF771Q7L3S4 317 aaPredicted RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 SERINC5Q86VE9 423 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 GOLGA5Q8TBA6 731 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 TUBGCP2Q9BSJ2 902 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 FGFR1OPO95684 399 aaKnown RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 EEF1GP26641 437 aaKnown RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 MATR3P43243 847 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 COPB1P53618 953 aaKnown RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 SEZ6Q53EL9 994 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 TAF2Q6P1X5 1199 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 ZBTB33Q86T24 672 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 FAM114A1Q8IWE2 563 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 ARMC5Q96C12 935 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 CPB2Q96IY4 423 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 MRPL4Q9BYD3 311 aaKnown RBP17.76■□□□□ 0.43
SNAP47-213ENST00000617596 NFKBIZQ9BYH8 718 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 NOD1Q9Y239 953 aa17.76■□□□□ 0.43
SNAP47-213ENST00000617596 B4GALT4O60513 344 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 SGPL1O95470 568 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 SPAG1Q07617 926 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 PRPF4BQ13523 1007 aaKnown RBP17.75■□□□□ 0.43
SNAP47-213ENST00000617596 PKN2Q16513 984 aaKnown RBP17.75■□□□□ 0.43
SNAP47-213ENST00000617596 AMHR2Q16671 573 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 TMEM132AQ24JP5 1023 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 ZNF410Q86VK4 478 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 SPC24Q8NBT2 197 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 KCNN1Q92952 543 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 ACO2Q99798 780 aaKnown RBP17.75■□□□□ 0.43
SNAP47-213ENST00000617596 SENP6Q9GZR1 1112 aaPredicted RBP17.75■□□□□ 0.43
SNAP47-213ENST00000617596 FAM53CQ9NYF3 392 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 PYCARDQ9ULZ3 195 aa17.75■□□□□ 0.43
SNAP47-213ENST00000617596 SPDYE4A6NLX3 237 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 ACKR2O00590 384 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 N4BP3O15049 544 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 THPOP40225 353 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 MNX1P50219 401 aaPredicted RBP17.74■□□□□ 0.43
SNAP47-213ENST00000617596 ATN1P54259 1190 aaPredicted RBP17.74■□□□□ 0.43
SNAP47-213ENST00000617596 POU5F1BQ06416 359 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 NFIL3Q16649 462 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 ZBTB41Q5SVQ8 909 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 CBWD2Q8IUF1 395 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 XXYLT1Q8NBI6 393 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 ANKRD20A12PQ8NF67 263 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
SNAP47-213ENST00000617596 DHX38Q92620 1227 aaKnown RBP17.74■□□□□ 0.43
SNAP47-213ENST00000617596 TCHPQ9BT92 498 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 NOC4LQ9BVI4 516 aaKnown RBP17.74■□□□□ 0.43
SNAP47-213ENST00000617596 OSBPL7Q9BZF2 842 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 A0A1B0GTH6 734 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 LRRC10BA6NIK2 292 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 ARVCFO00192 962 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 PIGRP01833 764 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 EPB41P11171 864 aaKnown RBP17.74■□□□□ 0.43
SNAP47-213ENST00000617596 ABCD1P33897 745 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 PSMC2P35998 433 aaKnown RBP17.74■□□□□ 0.43
SNAP47-213ENST00000617596 MIIPQ5JXC2 388 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 EEF1DP3Q658K8 133 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 IFNLR1Q8IU57 520 aaPredicted RBP17.74■□□□□ 0.43
SNAP47-213ENST00000617596 SLC9A9Q8IVB4 645 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 FAM186BQ8IYM0 893 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 GCOM2Q9BZD3 368 aaPredicted RBP17.74■□□□□ 0.43
SNAP47-213ENST00000617596 CRISPLD2Q9H0B8 497 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 TSPYL1Q9H0U9 437 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 FRMD4BQ9Y2L6 1034 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 CDY2AQ9Y6F7 541 aa17.74■□□□□ 0.43
SNAP47-213ENST00000617596 TSPAN1O60635 241 aa17.73■□□□□ 0.43
SNAP47-213ENST00000617596 CHRNA1P02708 482 aa17.73■□□□□ 0.43
SNAP47-213ENST00000617596 ADRB2P07550 413 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms