RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	ZNF564	Q8TBZ8	553 aa	Predicted RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	LPAR1	Q92633	364 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	OSBP2	Q969R2	916 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	NR1H4	Q96RI1	486 aa	Predicted RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	TMEM47	Q9BQJ4	181 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	PDE11A	Q9HCR9	933 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	TRPC7	Q9HCX4	862 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	BFAR	Q9NZS9	450 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	ROBO2	Q9HCK4	1378 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	TSPOAP1	O95153	1857 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	PIK3R2	O00459	728 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	MAGEB2	O15479	319 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	CTNND1	O60716	968 aa	Known RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	RPLP2	P05387	115 aa	Known RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	PRKCB	P05771	671 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	HSPA1A	P0DMV8	641 aa	Known RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	HSPA1B	P0DMV9	641 aa	Known RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	MORF4L2	Q15014	288 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	TAF1C	Q15572	869 aa	Predicted RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	KNOP1	Q1ED39	458 aa	Known RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	SMARCAD1	Q9H4L7	1026 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	JCAD	Q9P266	1359 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	CFAP69	A5D8W1	941 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	SPDYE5	A6NIY4	337 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	PI4K2B	G5E9Z4	385 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	DFFA	O00273	331 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	TADA2A	O75478	443 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	HIST1H2AD	P20671	130 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	HDAC4	P56524	1084 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	OCA2	Q04671	838 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	NNT	Q13423	1086 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	ZKSCAN8	Q15776	578 aa	Predicted RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	SPDYE7P	Q495Y7	208 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	SV2C	Q496J9	727 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	MTHFD1L	Q6UB35	978 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	RRM2B	Q7LG56	351 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	KLHL29	Q96CT2	875 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	HIST1H2AH	Q96KK5	128 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	MED15	Q96RN5	788 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	HIST1H2AJ	Q99878	128 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	H2AFJ	Q9BTM1	129 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	NUP85	Q9BW27	656 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	TDRD3	Q9H7E2	651 aa	Known RBP	7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	GIMAP4	Q9NUV9	329 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	SH3BP1	Q9Y3L3	701 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	KAT6B	Q8WYB5	2073 aa		7.81	□□□□□ -1.16
PCDH15-231	ENST00000617271	CROCC2	H7BZ55	1655 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	LRRIQ3	A6PVS8	624 aa	Predicted RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	SYCE1L	A8MT33	242 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	SYF2	O95926	243 aa	Known RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	CETP	P11597	493 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	GCK	P35557	465 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	PPARD	Q03181	441 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	RHOT1	Q8IXI2	618 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	C17orf53	Q8N3J3	647 aa	Predicted RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	RUBCN	Q92622	972 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	ANTXR1	Q9H6X2	564 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	SYNDIG1	Q9H7V2	258 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	SARS2	Q9NP81	518 aa	Known RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	ANLN	Q9NQW6	1124 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	PCDHB6	Q9Y5E3	794 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	ARIH2	O95376	493 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	CPT1A	P50416	773 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	TPI1	P60174	286 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	NME3	Q13232	169 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	RAPGEF5	Q92565	580 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	SNF8	Q96H20	258 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	PAWR	Q96IZ0	340 aa	Known RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	STRBP	Q96SI9	672 aa	Known RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	MRGBP	Q9NV56	204 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	RBAK	Q9NYW8	714 aa	Predicted RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	WDR35	Q9P2L0	1181 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	ARHGAP26	Q9UNA1	814 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	MINPP1	Q9UNW1	487 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	PCDHA10	Q9Y5I2	948 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	SPATA31A6	Q5VVP1	1343 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	FAM187A	A6NFU0	413 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271		H7C4K7	107 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	ENC1	O14682	589 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	MFAP3L	O75121	409 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	PLEKHA8P1	O95397	391 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	FGG	P02679	453 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	CHRNA3	P32297	505 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	FCGRT	P55899	365 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	SNRPF	P62306	86 aa	Known RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	REST	Q13127	1097 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	DUOXA2	Q1HG44	320 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	PKN3	Q6P5Z2	889 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	ABHD8	Q96I13	439 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	BCL2L12	Q9HB09	334 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	JPH1	Q9HDC5	661 aa	Predicted RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	TBK1	Q9UHD2	729 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	TPX2	Q9ULW0	747 aa	Known RBP	7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	C5orf58	C9J3I9	102 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	TRPA1	O75762	1119 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	ACADSB	P45954	432 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	RBP5	P82980	135 aa		7.8	□□□□□ -1.16
PCDH15-231	ENST00000617271	ARHGEF7	Q14155	803 aa		7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms