RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 NME8Q8N427 588 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 RNF214Q8ND24 703 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ZMYND8Q9ULU4 1186 aaPredicted RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 A0A088AWK7 358 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 KRT87PA6NCN2 255 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 MEIS1O00470 390 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 MAFGO15525 162 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 MAN1A2O60476 641 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 APOA4P06727 396 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ZNF10P21506 573 aaPredicted RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 DHPSP49366 369 aaPredicted RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 ESRP1Q6NXG1 681 aaKnown RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 TEX2Q8IWB9 1127 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 LLPHQ9BRT6 129 aaKnown RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 STK33Q9BYT3 514 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 GPRC5DQ9NZD1 345 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 JMJD7P0C870 316 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 CCL5P13501 91 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 GRIK1P39086 918 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 TTBK2Q6IQ55 1244 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 CNKSR3Q6P9H4 555 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 NUP88Q99567 741 aaPredicted RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 NOB1Q9ULX3 412 aaKnown RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 A0A087WZ62 844 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ZBED1O96006 694 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 CDC25CP30307 473 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 TDHQ8IZJ6 230 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 LARP6Q9BRS8 491 aaKnown RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 NLRC5Q86WI3 1866 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 CFIP05156 583 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 CYP2A6P11509 494 aaPredicted RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 MTMR2Q13614 643 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 TBC1D9BQ66K14 1250 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 GRIN3AQ8TCU5 1115 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 TIFAQ96CG3 184 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 PAGE5Q96GU1 130 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 TGS1Q96RS0 853 aaKnown RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 KMT5AQ9NQR1 393 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ZNF510Q9Y2H8 683 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 DNA2P51530 1060 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 CYP27A1Q02318 531 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 TGM3Q08188 693 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 TTC38Q5R3I4 469 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 LRRN4CLQ8ND94 238 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 XAGE2Q96GT9 111 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 CCDC177Q9NQR7 707 aaPredicted RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 KCTD5Q9NXV2 234 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 MRPS23Q9Y3D9 190 aaKnown RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 TTLL8A6PVC2 850 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 NFATC1O95644 943 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 VARSP26640 1264 aaKnown RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 ZNF235Q14590 738 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 CAMK4Q16566 473 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 USP39Q53GS9 565 aaKnown RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 SUSD6Q92537 303 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 LGMNQ99538 433 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 MRPL44Q9H9J2 332 aaKnown RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 LUC7L2Q9Y383 392 aaKnown RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 RALGAPA2Q2PPJ7 1873 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 NRXN2Q9P2S2 1712 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 STRCP1A6NGW2 1772 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 PIM1P11309 404 aaPredicted RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 ANO4Q32M45 955 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 MYCBPAPQ8TBZ2 947 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 FAF2Q96CS3 445 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 C17orf62Q9BQA9 187 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 LAMA4Q16363 1823 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 TAF5LO75529 589 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 GLUD1P00367 558 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 RFC5P40937 340 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 ATP13A4Q4VNC1 1196 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 TMEM259Q4ZIN3 620 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 EOGTQ5NDL2 527 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 ICE2Q659A1 982 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 TAF2Q6P1X5 1199 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 CYP2U1Q7Z449 544 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 CCDC110Q8TBZ0 833 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 MYCBPQ99417 103 aaPredicted RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 TIPINQ9BVW5 301 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 LRWD1Q9UFC0 647 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 RALGAPA1Q6GYQ0 2036 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 PSMD12O00232 456 aaPredicted RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 DNAJC6O75061 913 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 KIAA0319Q5VV43 1072 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 PAOXQ6QHF9 649 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 PRKRIP1Q9H875 184 aaPredicted RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 TXLNGQ9NUQ3 528 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 GIMAP4Q9NUV9 329 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 PRMT7Q9NVM4 692 aaPredicted RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 SRP68Q9UHB9 627 aaKnown RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 KLF18A0A0U1RQI7 1052 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 E5RI56 91 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 IGHEP01854 428 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 CXCR2P25025 360 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 STILQ15468 1287 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 UAP1L1Q3KQV9 507 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 USP33Q8TEY7 942 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 REXO5Q96IC2 774 aaKnown RBP3.59□□□□□ -1.84
LPP-220ENST00000617246 ZFP42Q96MM3 310 aa3.59□□□□□ -1.84
LPP-220ENST00000617246 NAP1L3Q99457 506 aaPredicted RBP3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms