RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 A0A1W2PQJ5 194 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 PDXKO00764 312 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 RTN2O75298 545 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 GUCY1A2P33402 732 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 LRRC36Q1X8D7 754 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 ARMCX2Q7L311 632 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 JAMLQ86YT9 394 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 EXT2Q93063 718 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 PDP2Q9P2J9 529 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 TBXAS1P24557 533 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 VHLP40337 213 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 ALDH18A1P54886 795 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 OSTNP61366 133 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 TSTA3Q13630 321 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 NAB2Q15742 525 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 ELOA2Q8IYF1 753 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 MCPH1Q8NEM0 835 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC35G2Q8TBE7 412 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 TEKT4Q8WW24 435 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 RAPGEF5Q92565 580 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 ARL8AQ96BM9 186 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 RPS6KC1Q96S38 1066 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 ERP44Q9BS26 406 aa11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 RPF1Q9H9Y2 349 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L5A8MUK1 530 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 GSG1L2A8MUP6 293 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 SUPT3HO75486 399 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CYP2D6P10635 497 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 PRELPP51888 382 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 TRIP10Q15642 601 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 RHPN2Q8IUC4 686 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 C9orf72Q96LT7 481 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 PALMDQ9NP74 551 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 BFARQ9NZS9 450 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CPSF3Q9UKF6 684 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 AKT3Q9Y243 479 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 DEAF1O75398 565 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 TRIM49P0CI25 452 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 TRIM49CP0CI26 452 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 LTKP29376 864 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CCND2P30279 289 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 BCAR1P56945 870 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 PDXDC2PQ6P474 469 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 FAM160B2Q86V87 743 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 DDX42Q86XP3 938 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 KIAA2013Q8IYS2 634 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CNPY4Q8N129 248 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 ANKS1AQ92625 1134 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CPVLQ9H3G5 476 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CCDC134Q9H6E4 229 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 UVRAGQ9P2Y5 699 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC12A6Q9UHW9 1150 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 MTO1Q9Y2Z2 717 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 UBE4BO95155 1302 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 SPDYE2BA6NHP3 402 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 SYF2O95926 243 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 SPDYE6P0CI01 402 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 SERPINB10P48595 397 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 TRPC1P48995 793 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 ROR1Q01973 937 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 PDIA5Q14554 519 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 DACH2Q96NX9 599 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 LBHD1Q9BQE6 289 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 THTPAQ9BU02 230 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 PSMC3IPQ9P2W1 217 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 PCSK1NQ9UHG2 260 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 ZNF229Q9UJW7 825 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 LZTS1Q9Y250 596 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CSADQ9Y600 493 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 METP08581 1390 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 PALLDQ8WX93 1383 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 B2RBV5 119 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 DAB1O75553 588 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 HSD17B3P37058 310 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CTCFP49711 727 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CEP55Q53EZ4 464 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 TRAPPC11Q7Z392 1133 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 NCAPG2Q86XI2 1143 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 C4orf33Q8N1A6 199 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 C7orf25Q9BPX7 421 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 STK33Q9BYT3 514 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 DDX28Q9NUL7 540 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 BSDC1Q9NW68 430 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 PKD2L2Q9NZM6 624 aa11.29□□□□□ -0.6
CLTCL1-209ENST00000617103 CPDO75976 1380 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 LRRIQ3A6PVS8 624 aaPredicted RBP11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L15C9J2P7 530 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L13C9JLJ4 530 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L11C9JVI0 530 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L18D6R9N7 530 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L22D6RA61 530 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L17D6RBQ6 530 aa11.28□□□□□ -0.6
CLTCL1-209ENST00000617103 USP17L19D6RCP7 530 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms