RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 GAB3Q8WWW8 586 aa4.84□□□□□ -1.63
CBWD1-224ENST00000616803 MNTQ99583 582 aa4.84□□□□□ -1.63
CBWD1-224ENST00000616803 ZNF768Q9H5H4 540 aaKnown RBP4.84□□□□□ -1.63
CBWD1-224ENST00000616803 USP35Q9P2H5 1018 aa4.84□□□□□ -1.63
CBWD1-224ENST00000616803 PRSS50Q9UI38 385 aa4.84□□□□□ -1.63
CBWD1-224ENST00000616803 GIT1Q9Y2X7 761 aa4.84□□□□□ -1.63
CBWD1-224ENST00000616803 FMN1Q68DA7 1419 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 TLDC2A0PJX2 215 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 DAPK3O43293 454 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 HOXA3O43365 443 aaPredicted RBP4.83□□□□□ -1.64
CBWD1-224ENST00000616803 TMEM127O75204 238 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 RPS6KA4O75676 772 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 ZNF202O95125 648 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 JUNP05412 331 aaKnown RBP4.83□□□□□ -1.64
CBWD1-224ENST00000616803 HK1P19367 917 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 POU3F3P20264 500 aaPredicted RBP4.83□□□□□ -1.64
CBWD1-224ENST00000616803 MGAT5Q09328 741 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 SPIDRQ14159 915 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 KRT40Q6A162 431 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 CCDC62Q6P9F0 684 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 ZZZ3Q8IYH5 903 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 PPM1KQ8N3J5 372 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 OR2W6PQ8NHA6 318 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 SLC5A5Q92911 643 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 MIEF2Q96C03 454 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 EAF2Q96CJ1 260 aaPredicted RBP4.83□□□□□ -1.64
CBWD1-224ENST00000616803 MPHOSPH9Q99550 1183 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 TEX101Q9BY14 249 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 SLITRK6Q9H5Y7 841 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 RCAN3Q9UKA8 241 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 PLAAQ9Y263 795 aa4.83□□□□□ -1.64
CBWD1-224ENST00000616803 IFT140Q96RY7 1462 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 PHLDB1Q86UU1 1377 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 KDM1AO60341 852 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 LSP1P33241 339 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 FAM189BP81408 668 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 STRN3Q13033 797 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 TUBA3CQ13748 450 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 FHL2Q14192 279 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 DDB1Q16531 1140 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 TUBA3EQ6PEY2 450 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 USP51Q70EK9 711 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 TAS1R1Q7RTX1 841 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 AHI1Q8N157 1196 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 THEMISQ8N1K5 641 aaPredicted RBP4.82□□□□□ -1.64
CBWD1-224ENST00000616803 MDGA1Q8NFP4 955 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 ATXN2LQ8WWM7 1075 aaKnown RBP4.82□□□□□ -1.64
CBWD1-224ENST00000616803 CLIP3Q96DZ5 547 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 HIST1H2AHQ96KK5 128 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 UIMC1Q96RL1 719 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 HIST1H2AJQ99878 128 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 GPR87Q9BY21 358 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 IKZF4Q9H2S9 585 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 C14orf93Q9H972 538 aaKnown RBP4.82□□□□□ -1.64
CBWD1-224ENST00000616803 MSL2Q9HCI7 577 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 TRPS1Q9UHF7 1281 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 NUMBLQ9Y6R0 609 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 IQGAP2Q13576 1575 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 ARHGEF11O15085 1522 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 UGGT2Q9NYU1 1516 aa4.82□□□□□ -1.64
CBWD1-224ENST00000616803 MASP1P48740 699 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 LGALS4P56470 323 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 PPARAQ07869 468 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 ATP13A4Q4VNC1 1196 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 PCSK4Q6UW60 755 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 FRMD7Q6ZUT3 714 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 HTR3DQ70Z44 454 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 NOP9Q86U38 636 aaKnown RBP4.81□□□□□ -1.64
CBWD1-224ENST00000616803 RASSF3Q86WH2 238 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 SYT12Q8IV01 421 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 PASD1Q8IV76 773 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 CDYL2Q8N8U2 506 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 FERMT2Q96AC1 680 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 KCTD10Q9H3F6 313 aa4.81□□□□□ -1.64
CBWD1-224ENST00000616803 SUPT6HQ7KZ85 1726 aaKnown RBP4.8□□□□□ -1.64
CBWD1-224ENST00000616803 EIF4G3O43432 1585 aaKnown RBP4.8□□□□□ -1.64
CBWD1-224ENST00000616803 AHRRA9YTQ3 701 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 LEFTY2O00292 366 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 ADCY6O43306 1168 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 FSBPO95073 299 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 EYA4O95677 639 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 MAN2A2P49641 1150 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 CCT2P78371 535 aaKnown RBP4.8□□□□□ -1.64
CBWD1-224ENST00000616803 HHEXQ03014 270 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 CRHR2Q13324 411 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 MRPL49Q13405 166 aaKnown RBP4.8□□□□□ -1.64
CBWD1-224ENST00000616803 BTNL9Q6UXG8 535 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 LDLRAD3Q86YD5 345 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 UNC5BQ8IZJ1 945 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 OR5M3Q8NGP4 307 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 TGFBRAP1Q8WUH2 860 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 NEU4Q8WWR8 484 aaPredicted RBP4.8□□□□□ -1.64
CBWD1-224ENST00000616803 CEP95Q96GE4 821 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 MLST8Q9BVC4 326 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 USP36Q9P275 1121 aaKnown RBP4.8□□□□□ -1.64
CBWD1-224ENST00000616803 MAPRE3Q9UPY8 281 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 MAPKBP1O60336 1514 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 EHBP1L1Q8N3D4 1523 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 SETD5Q9C0A6 1442 aa4.8□□□□□ -1.64
CBWD1-224ENST00000616803 HECW1Q76N89 1606 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms