RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 STK39Q9UEW8 545 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 DBR1Q9UK59 544 aaKnown RBP23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 SORCS3Q9UPU3 1222 aa23.13■■□□□ 1.29
TRAPPC3-208ENST00000616074 INO80B-WBP1J3KQ70 363 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 JAK2O60674 1132 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 LILRB3O75022 631 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 BRD1O95696 1058 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 NEFLP07196 543 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 CNPP09543 421 aaKnown RBP23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 AXLP30530 894 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 CLCN4P51793 760 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 PLXNA3P51805 1871 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 MBTD1Q05BQ5 628 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 CAPSQ13938 189 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 PCBP1Q15365 356 aaKnown RBP eCLIP23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 NOTUMQ6P988 496 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 IFNLR1Q8IU57 520 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 DIS3L2Q8IYB7 885 aaKnown RBP23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 TDRD5Q8NAT2 981 aaKnown RBP23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 PRRX2Q99811 253 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 EMILIN2Q9BXX0 1053 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 SMOC2Q9H3U7 446 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 SFXN1Q9H9B4 322 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 UBN1Q9NPG3 1134 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 ANKEF1Q9NU02 776 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 PRG3Q9Y2Y8 225 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 HES2Q9Y543 173 aa23.12■■□□□ 1.29
TRAPPC3-208ENST00000616074 NEMFO60524 1076 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 DGAT1O75907 488 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 ASGR2P07307 311 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 KLRC2P26717 231 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 MLH1P40692 756 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 TXKP42681 527 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 TFDP1Q14186 410 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 AMHR2Q16671 573 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 COLGALT2Q8IYK4 626 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 CCDC51Q96ER9 411 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 GAD1Q99259 594 aa23.11■■□□□ 1.29
TRAPPC3-208ENST00000616074 ARL5CA6NH57 179 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 INPPL1O15357 1258 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 SOD2P04179 222 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 GLRA2P23416 452 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 AVPR2P30518 371 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 ARL2P36404 184 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 RARRES1P49788 294 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 POU5F1BQ06416 359 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 UBALD2Q8IYN6 164 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 ZDHHC14Q8IZN3 488 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 CCDC43Q96MW1 224 aaKnown RBP23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 MTMR9Q96QG7 549 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 HERC2P3Q9BVR0 1158 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 CSRNP2Q9H175 543 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 MRPL17Q9NRX2 175 aaKnown RBP23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 MIOSQ9NXC5 875 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 USTQ9Y2C2 406 aa23.1■■□□□ 1.29
TRAPPC3-208ENST00000616074 A0A087WWV3 80 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 SPDYE4A6NLX3 237 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 C2CD2LO14523 706 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 ARF4P18085 180 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 OR1G1P47890 313 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 SCNN1GP51170 649 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 TAS1R1Q7RTX1 841 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 GPR149Q86SP6 731 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 PIGOQ8TEQ8 1089 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 ZFP42Q96MM3 310 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 APOL6Q9BWW8 343 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 LIMD1Q9UGP4 676 aa23.09■■□□□ 1.29
TRAPPC3-208ENST00000616074 POTEMA6NI47 508 aa23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 B4GALT5O43286 388 aa23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 URODP06132 367 aa23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 DSC1Q08554 894 aa23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 NCBP1Q09161 790 aaKnown RBP23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 ST3GAL1Q11201 340 aa23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 RNF168Q8IYW5 571 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 NFKBIZQ9BYH8 718 aa23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 POLR3FQ9H1D9 316 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 TMEM60Q9H2L4 133 aa23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 NXF3Q9H4D5 531 aaKnown RBP23.08■■□□□ 1.29
TRAPPC3-208ENST00000616074 MYO15AQ9UKN7 3530 aa23.08■■□□□ 1.28
TRAPPC3-208ENST00000616074 F8W810 466 aa23.07■■□□□ 1.28
TRAPPC3-208ENST00000616074 USO1O60763 962 aaKnown RBP23.07■■□□□ 1.28
TRAPPC3-208ENST00000616074 EFEMP2O95967 443 aa23.07■■□□□ 1.28
TRAPPC3-208ENST00000616074 NEK4P51957 841 aa23.07■■□□□ 1.28
TRAPPC3-208ENST00000616074 TRIM29Q14134 588 aa23.07■■□□□ 1.28
TRAPPC3-208ENST00000616074 CDR2LQ86X02 465 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC3-208ENST00000616074 PLCD3Q8N3E9 789 aa23.07■■□□□ 1.28
TRAPPC3-208ENST00000616074 RPS6KC1Q96S38 1066 aa23.07■■□□□ 1.28
TRAPPC3-208ENST00000616074 TRIM6Q9C030 488 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC3-208ENST00000616074 CCDC149Q6ZUS6 474 aa23.06■■□□□ 1.28
TRAPPC3-208ENST00000616074 GPRC5CQ9NQ84 441 aa23.06■■□□□ 1.28
TRAPPC3-208ENST00000616074 MAN1C1Q9NR34 630 aa23.06■■□□□ 1.28
TRAPPC3-208ENST00000616074 GIT1Q9Y2X7 761 aa23.06■■□□□ 1.28
TRAPPC3-208ENST00000616074 TEX28O15482 410 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 NPTXRO95502 500 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 SPATA31C1P0DKV0 1188 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 ATP2B1P20020 1258 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 AKAP5P24588 427 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 GLUD2P49448 558 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 KIAA0319Q5VV43 1072 aa23.05■■□□□ 1.28
TRAPPC3-208ENST00000616074 C15orf39Q6ZRI6 1047 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms