RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ZNF827Q17R98 1081 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 MAP3K21Q5TCX8 1036 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 ENGASEQ8NFI3 743 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 CCDC151A5D8V7 595 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 CTSHP09668 335 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 Q4G0T1 1027 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZNF557Q8N988 423 aaPredicted RBP10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 DNAAF3Q8N9W5 541 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZMYND12Q9H0C1 365 aa10.4□□□□□ -0.74
TNFRSF9-204ENST00000615230 RHOXF2BP0C7M4 288 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 CAPN2P17655 700 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 GNA15P30679 374 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 OXCT1P55809 520 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 MAP1SQ66K74 1059 aaPredicted RBP10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 METTL7BQ6UX53 244 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 ZNF410Q86VK4 478 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 KRT222Q8N1A0 295 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 SRBD1Q8N5C6 995 aaKnown RBP10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 FBXL13Q8NEE6 735 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 SCG3Q8WXD2 468 aaKnown RBP10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 TSPAN18Q96SJ8 248 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 RHOXF2Q9BQY4 288 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 CARD6Q9BX69 1037 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 TRIM45Q9H8W5 580 aaPredicted RBP10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 XPNPEP3Q9NQH7 507 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 FANCLQ9NW38 375 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 ADAM22Q9P0K1 906 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 DNAJC12Q9UKB3 198 aa10.4□□□□□ -0.75
TNFRSF9-204ENST00000615230 GADD45BO75293 160 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 GARTP22102 1010 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 PHEXP78562 749 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 EXOSC10Q01780 885 aaKnown RBP10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 KAZNQ674X7 775 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 MSL3Q8N5Y2 521 aaKnown RBP10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 USP13Q92995 863 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 GLIS2Q9BZE0 524 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 ZWILCHQ9H900 591 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 MAP2P11137 1827 aaKnown RBP10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 GSTA1P08263 222 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 GSTA2P09210 222 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 PMLP29590 882 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 SOX5P35711 763 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 RWDD2BP57060 319 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 SH2D4BQ5SQS7 431 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 PXMP2Q9NR77 195 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 SLC4A7Q9Y6M7 1214 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 PPP1R12AO14974 1030 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 TAC1P20366 129 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 VPS39Q96JC1 886 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 UROC1Q96N76 676 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 SLITRK1Q96PX8 696 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 TRPC7Q9HCX4 862 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 RWDD3Q9Y3V2 267 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 NOL3O60936 208 aaKnown RBP10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 TMCC1O94876 653 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 NAMPTP43490 491 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 OR1G1P47890 313 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 HSD17B4P51659 736 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 EPHB3P54753 998 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 ERVK-9P63128 1117 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 ERVK-24P63145 666 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 NBPF12Q5TAG4 269 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 TXNRD3Q86VQ6 643 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 RIOX2Q8IUF8 465 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 PANX2Q96RD6 677 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 XYLBO75191 536 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 INHBAP08476 426 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 ASAP3Q8TDY4 903 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 VCXQ9H320 206 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 TUBE1Q9UJT0 475 aa10.39□□□□□ -0.75
TNFRSF9-204ENST00000615230 WNT10BO00744 389 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 CSPG5O95196 566 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 CYP2C8P10632 490 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 CAV1Q03135 178 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 ATRIPQ8WXE1 791 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 FSD1LQ9BXM9 530 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 PARVAQ9NVD7 372 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 TLK1Q9UKI8 766 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 MAD1L1Q9Y6D9 718 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 ROBO1Q9Y6N7 1651 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 PI4K2BG5E9Z4 385 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 UPP2O95045 317 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 CHEK2O96017 543 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 CYP2C19P33261 490 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 ACTR2P61160 394 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 GPC5P78333 572 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 DDX53Q86TM3 631 aaKnown RBP10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 ZNF677Q86XU0 584 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 SLAIN1Q8ND83 568 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 STN1Q9H668 368 aaKnown RBP10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 ANKRD26Q9UPS8 1709 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 POTEFA5A3E0 1075 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 ADCY3O60266 1144 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 POTEIP0CG38 1075 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 SLC1A1P43005 524 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 DDR1Q08345 913 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 POTEEQ6S8J3 1075 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 TMEM270Q6UE05 265 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 HOMEZQ8IX15 550 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms