RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 KRT17Q04695 432 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 LONRF1Q17RB8 773 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 TMEM63BQ5T3F8 832 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 PROSER2Q86WR7 435 aaPredicted RBP14.56□□□□□ -0.08
CHD1-212ENST00000614616 FOXP3Q9BZS1 431 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 SCN3BQ9NY72 215 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 STX7O15400 261 aaKnown RBP14.56□□□□□ -0.08
CHD1-212ENST00000614616 IL12RB1P42701 662 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 ZAP70P43403 619 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 BCL10O95999 233 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.56□□□□□ -0.08
CHD1-212ENST00000614616 SCG3Q8WXD2 468 aaKnown RBP14.56□□□□□ -0.08
CHD1-212ENST00000614616 CAVIN3Q969G5 261 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 RPS6KC1Q96S38 1066 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 C1orf50Q9BV19 199 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 TMEM245Q9H330 911 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 TMBIM4Q9HC24 238 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 STK36Q9NRP7 1315 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 DDX39AO00148 427 aaKnown RBP14.56□□□□□ -0.08
CHD1-212ENST00000614616 S100A1P23297 94 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 IL13P35225 146 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 ZC3H12BQ5HYM0 836 aaKnown RBP14.56□□□□□ -0.08
CHD1-212ENST00000614616 TRIM74Q86UV6 250 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 TRIM73Q86UV7 250 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 ZBED8Q8IZ13 594 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 TMEM206Q9H813 350 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 ATP10DQ9P241 1426 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 COPAP53621 1224 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 ZMYM1Q5SVZ6 1142 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 ITFG2Q969R8 447 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 NUP85Q9BW27 656 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 DMC1Q14565 340 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 SUPT20HQ8NEM7 779 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 LLGL1Q15334 1064 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 TRADDQ15628 312 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 KLHL12Q53G59 568 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 TMA16Q96EY4 203 aaKnown RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 YTHDC2Q9H6S0 1430 aaKnown RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 ADGRL3Q9HAR2 1447 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 H3BQF6 201 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 CYP21A2P08686 494 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 STX19Q8N4C7 294 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 IRX2Q9BZI1 471 aaPredicted RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 MANSC1Q9H8J5 431 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 DDX18Q9NVP1 670 aaKnown RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 ADGRL2O95490 1459 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 USH1GQ495M9 461 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 ZNF589Q86UQ0 364 aaPredicted RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 MXD3Q9BW11 206 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 NINQ8N4C6 2090 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 KDM6BO15054 1643 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 C16orf72Q14CZ0 275 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 IZUMO2Q6UXV1 221 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 ZNF554Q86TJ5 538 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 TNKSO95271 1327 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 VIL1P09327 827 aaKnown RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 SLC1A4P43007 532 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 MECOMQ03112 1051 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 ITKQ08881 620 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 NLRP9Q7RTR0 991 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 PCDHB6Q9Y5E3 794 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 MAST3O60307 1309 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 FCHO2Q0JRZ9 810 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 PDIA2Q13087 525 aaKnown RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 KRT26Q7Z3Y9 468 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 COMMD3-BMI1R4GMX3 469 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 RAPGEF3O95398 923 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 ALBP02768 609 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 ZNF18P17022 549 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 GLMNQ92990 594 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 ALDH8A1Q9H2A2 487 aaPredicted RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 MMADHCQ9H3L0 296 aaPredicted RBP14.55□□□□□ -0.08
CHD1-212ENST00000614616 ZNF212Q9UDV6 495 aa14.55□□□□□ -0.08
CHD1-212ENST00000614616 M0R2C6 588 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 POLGP54098 1239 aaPredicted RBP14.54□□□□□ -0.08
CHD1-212ENST00000614616 GCKRQ14397 625 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 FUKQ8N0W3 1084 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 NFATC2IPQ8NCF5 419 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 SEPT1Q8WYJ6 367 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 FANCEQ9HB96 536 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 ANXA13P27216 316 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 EGFL6Q8IUX8 553 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 ZNF786Q8N393 782 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 PCYOX1LQ8NBM8 494 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 MCRS1Q96EZ8 462 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 NLRP3Q96P20 1036 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 FHDC1Q9C0D6 1143 aaPredicted RBP14.54□□□□□ -0.08
CHD1-212ENST00000614616 MBD2Q9UBB5 411 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 HBS1LQ9Y450 684 aaKnown RBP14.54□□□□□ -0.08
CHD1-212ENST00000614616 TEX33O43247 280 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 RAD51CO43502 376 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 RFX1P22670 979 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 C19orf60Q96EN9 201 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 EFCAB14O75071 495 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 GPKOWQ92917 476 aaPredicted RBP eCLIP14.54□□□□□ -0.084e-6■□□□□ 10.1
CHD1-212ENST00000614616 MAGI2Q86UL8 1455 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 ITIH2P19823 946 aa14.54□□□□□ -0.08
CHD1-212ENST00000614616 SLC39A6Q13433 755 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms