RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SPRED1Q7Z699 444 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 GGNQ86UU5 652 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 MDGA1Q8NFP4 955 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 OR5M3Q8NGP4 307 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 ZNF480Q8WV37 535 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 SSH1Q8WYL5 1049 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 PDCD2LQ9BRP1 358 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 ACE2Q9BYF1 805 aaPredicted RBP6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 BRINP2Q9C0B6 783 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 PCDH12Q9NPG4 1184 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 DNAJC28Q9NX36 388 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 SCOCQ9UIL1 159 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 COL4A3BPQ9Y5P4 624 aa6.88□□□□□ -1.31
SCAMP1-205ENST00000614488 ALG1L2C9J202 215 aa6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 HOXA3O43365 443 aaPredicted RBP6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 MFAP3LO75121 409 aa6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 CASRP41180 1078 aa6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 GZMKP49863 264 aa6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 MST1LQ2TV78 715 aa6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 INAVAQ3KP66 663 aa6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 DCAF17Q5H9S7 520 aaPredicted RBP6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 MBNL2Q5VZF2 373 aaKnown RBP6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 HTR3DQ70Z44 454 aa6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 PRPF38AQ8NAV1 312 aaKnown RBP6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 TRIM8Q9BZR9 551 aa6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 GREM2Q9H772 168 aa6.87□□□□□ -1.31
SCAMP1-205ENST00000614488 STC2O76061 302 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 GNAT2P19087 354 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 CRHR1P34998 444 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 GUCY2FP51841 1108 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 USP39Q53GS9 565 aaKnown RBP6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 METTL24Q5JXM2 366 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 FAM180AQ6UWF9 173 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 DOK3Q7L591 496 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 LILRA3Q8N6C8 439 aaPredicted RBP6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 GPR156Q8NFN8 814 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 ST8SIA2Q92186 375 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 ZNF277Q9NRM2 450 aaPredicted RBP6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 GPRC5DQ9NZD1 345 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 GPR45Q9Y5Y3 372 aa6.86□□□□□ -1.31
SCAMP1-205ENST00000614488 ITGA10O75578 1167 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 CFBP00751 764 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 MAN2A2P49641 1150 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 RABGGTBP53611 331 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 CCT2P78371 535 aaKnown RBP6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 MALLQ13021 153 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 CRHR2Q13324 411 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 FAM214AQ32MH5 1076 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 NRN1LQ496H8 165 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 MUM1L1Q5H9M0 696 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 SYDE2Q5VT97 1194 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 AMOTL1Q8IY63 956 aa6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 GSPT2Q8IYD1 628 aaKnown RBP6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 ELOA2Q8IYF1 753 aaPredicted RBP6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 CBARPQ8N350 705 aaPredicted RBP6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 RIN2Q8WYP3 895 aaPredicted RBP6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 CDC5LQ99459 802 aaKnown RBP6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 ZNF703Q9H7S9 590 aaPredicted RBP6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 RBM12Q9NTZ6 932 aaKnown RBP6.85□□□□□ -1.31
SCAMP1-205ENST00000614488 AGXTP21549 392 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 SCNN1GP51170 649 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 MTMR1Q13613 665 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 RRP1BQ14684 758 aaKnown RBP6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 PTPROQ16827 1216 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 NAIF1Q69YI7 327 aaPredicted RBP6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 Q6ZRM9 215 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 PDZD4Q76G19 769 aaPredicted RBP6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 TMPRSS6Q8IU80 811 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 C1orf210Q8IVY1 113 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 IL17DQ8TAD2 202 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 ATXN2LQ8WWM7 1075 aaKnown RBP6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 EXTL1Q92935 676 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 EPC1Q9H2F5 836 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 TRPS1Q9UHF7 1281 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 TRHDEQ9UKU6 1024 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 ZBTB21Q9ULJ3 1066 aa6.84□□□□□ -1.31
SCAMP1-205ENST00000614488 KLRG2A4D1S0 409 aaPredicted RBP6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 ANKRD62A6NC57 917 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 GOLGA6L6A8MZA4 724 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 AKR1B10O60218 316 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 OSMP13725 252 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 ECHS1P30084 290 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 IARSP41252 1262 aaKnown RBP6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 MCAMP43121 646 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 KRT85P78386 507 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 APBA1Q02410 837 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 FOXE3Q13461 319 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 CNGB1Q14028 1251 aaPredicted RBP6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 MIIPQ5JXC2 388 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 C1QL3Q5VWW1 255 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 FAM83AQ86UY5 434 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 MB21D1Q8N884 522 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 C1orf162Q8NEQ5 155 aaPredicted RBP6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 GPR87Q9BY21 358 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 VPS11Q9H270 941 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 BCO1Q9HAY6 547 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 CLCA2Q9UQC9 943 aa6.83□□□□□ -1.32
SCAMP1-205ENST00000614488 B5MCH6 92 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 PLSCR1O15162 318 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 PPP3CAQ08209 521 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms