RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 RMDN3Q96TC7 470 aa12.91□□□□□ -0.34
TUBD1-216ENST00000613721 PDCD2LQ9BRP1 358 aa12.91□□□□□ -0.34
TUBD1-216ENST00000613721 PXMP2Q9NR77 195 aa12.91□□□□□ -0.34
TUBD1-216ENST00000613721 GINM1Q9NU53 330 aa12.91□□□□□ -0.34
TUBD1-216ENST00000613721 PNMA2Q9UL42 364 aa12.91□□□□□ -0.34
TUBD1-216ENST00000613721 COG5Q9UP83 839 aa12.91□□□□□ -0.34
TUBD1-216ENST00000613721 EXOC7Q9UPT5 735 aa12.91□□□□□ -0.34
TUBD1-216ENST00000613721 PLAAQ9Y263 795 aa12.91□□□□□ -0.34
TUBD1-216ENST00000613721 GRIN2DO15399 1336 aa12.91□□□□□ -0.34
TUBD1-216ENST00000613721 ARID2Q68CP9 1835 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 FAM170AA1A519 330 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 TESPA1A2RU30 521 aaPredicted RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 MYO1CO00159 1063 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 EIF3HO15372 352 aaKnown RBP eCLIP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 TTI1O43156 1089 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 ATP9AO75110 1047 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 ZBED4O75132 1171 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 HADHBP55084 474 aaKnown RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 PRPF4BQ13523 1007 aaKnown RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 FAM102BQ5T8I3 360 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 NSMFQ6X4W1 530 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 RNF207Q6ZRF8 634 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 GPC2Q8N158 579 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 RNPC3Q96LT9 517 aaKnown RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 NAP1L3Q99457 506 aaPredicted RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 TMEM117Q9H0C3 514 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 ANKEF1Q9NU02 776 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 LCMT1Q9UIC8 334 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 PFASO15067 1338 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 COL11A1P12107 1806 aaPredicted RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 PMM2O15305 246 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 CCNE2O96020 404 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 ADRB2P07550 413 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 USP8P40818 1118 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 SMTNP53814 917 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 ARHGEF16Q5VV41 709 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 LRIG3Q6UXM1 1119 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 RPUSD2Q8IZ73 545 aaKnown RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 PROCA1Q8NCQ7 364 aaPredicted RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 C1orf131Q8NDD1 294 aaKnown RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 NEUROG2Q9H2A3 272 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 CTTNBP2NLQ9P2B4 639 aa12.9□□□□□ -0.34
TUBD1-216ENST00000613721 UTP11Q9Y3A2 253 aaKnown RBP12.9□□□□□ -0.34
TUBD1-216ENST00000613721 KIAA1217Q5T5P2 1943 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 DICER1Q9UPY3 1922 aaKnown RBP12.89□□□□□ -0.35
TUBD1-216ENST00000613721 PHIPQ8WWQ0 1821 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 GOLGA6L10A0A0M3HER8 536 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 GOLGA8IPA6NC78 632 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 GOLGA6L10A6NI86 522 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 GOLGA8JA6NMD2 632 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 CCDC169A6NNP5 214 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 DAPK3O43293 454 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 FTLP02792 175 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-216ENST00000613721 HSD17B3P37058 310 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 BACE1P56817 501 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 DMP1Q13316 513 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-216ENST00000613721 CLUL1Q15846 466 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 PPP2R5EQ16537 467 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
TUBD1-216ENST00000613721 CEP85LQ5SZL2 805 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 NAA35Q5VZE5 725 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 C11orf63Q6NUN7 778 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 KDM7AQ6ZMT4 941 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 APOBEC3FQ8IUX4 373 aaKnown RBP12.89□□□□□ -0.35
TUBD1-216ENST00000613721 MAP4K3Q8IVH8 894 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 ZNF280CQ8ND82 737 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 SEC14L1Q92503 715 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 HVCN1Q96D96 273 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 KLRG1Q96E93 195 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 ATP6V1G3Q96LB4 118 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 SYT17Q9BSW7 474 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 CELF4Q9BZC1 486 aaKnown RBP12.89□□□□□ -0.35
TUBD1-216ENST00000613721 FAM114A2Q9NRY5 505 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 ZNF112Q9UJU3 913 aa12.89□□□□□ -0.35
TUBD1-216ENST00000613721 MIF4GDA9UHW6 222 aaKnown RBP12.88□□□□□ -0.35
TUBD1-216ENST00000613721 HMGB1P1B2RPK0 211 aaPredicted RBP12.88□□□□□ -0.35
TUBD1-216ENST00000613721 SORBS3O60504 671 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 RTN2O75298 545 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 PTENP60484 403 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 GPC5P78333 572 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
TUBD1-216ENST00000613721 POU5F1Q01860 360 aaKnown RBP12.88□□□□□ -0.35
TUBD1-216ENST00000613721 MAP2K1Q02750 393 aaPredicted RBP12.88□□□□□ -0.35
TUBD1-216ENST00000613721 MTMR3Q13615 1198 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 TCEAL1Q15170 157 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 DCAF15Q66K64 600 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 CBWD2Q8IUF1 395 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 PPM1KQ8N3J5 372 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 TMEM161BQ8NDZ6 487 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 RDM1Q8NG50 284 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 EPS8L1Q8TE68 723 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 KAT5Q92993 513 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 TSPYL1Q9H0U9 437 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 TBX20Q9UMR3 447 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 USP20Q9Y2K6 914 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
TUBD1-216ENST00000613721 ZNFX1Q9P2E3 1918 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms