RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 GINM1Q9NU53 330 aa12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 HOXC10Q9NYD6 342 aa12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 CELF2O95319 508 aaKnown RBP12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 CNTN2Q02246 1040 aa12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 DHX9Q08211 1270 aaKnown RBP12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 RPS6KA1Q15418 735 aa12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 MCF2L2Q86YR7 1114 aa12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 SCFD1Q8WVM8 642 aa12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 CRYGNQ8WXF5 182 aa12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 OSGEPQ9NPF4 335 aa12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 BTBD7Q9P203 1132 aa12.69□□□□□ -0.38
PPP4R3B-204ENST00000612688 TTI1O43156 1089 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 VIMP08670 466 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 PLA2G4BP0C869 781 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 MYBP10242 640 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 ITIH3Q06033 890 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 NOL9Q5SY16 702 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 ZNF572Q7Z3I7 529 aaPredicted RBP12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 CATSPER3Q86XQ3 398 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 RBM46Q8TBY0 533 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 MGARPQ8TDB4 240 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 AGAP11Q8TF27 550 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 ELAC2Q9BQ52 826 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 TEX13BQ9BXU2 312 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 ACTR5Q9H9F9 607 aaPredicted RBP12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 MLXIPLQ9NP71 852 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 IGLV3-22A0A075B6J6 115 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 TMEM110-MUSTN1A8MSY1 372 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 GFPT2O94808 682 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 SERPING1P05155 500 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 PDHA1P08559 390 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 HSD17B3P37058 310 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 KCNJ2P63252 427 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 PLCB4Q15147 1175 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 TLDC1Q6P9B6 456 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 SLFN12Q8IYM2 578 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 U2AF1L4Q8WU68 220 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 ASCC2Q9H1I8 757 aaPredicted RBP12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 KCNH7Q9NS40 1196 aa12.68□□□□□ -0.38
PPP4R3B-204ENST00000612688 CEP350Q5VT06 3117 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 IPO5O00410 1097 aaKnown RBP12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 MYL1P05976 194 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 GJA5P36382 358 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 MRPS9P82933 396 aaKnown RBP12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 PDIA5Q14554 519 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 CUEDC2Q9H467 287 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 EHMT1Q9H9B1 1298 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 FBXL5Q9UKA1 691 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 BRCA2P51587 3418 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 KRIT1O00522 736 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 LRRN2O75325 713 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 HNRNPH3P31942 346 aaKnown RBP12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 HSD17B4P51659 736 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 FSTL1Q12841 308 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 NAB2Q15742 525 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 SLC18A3Q16572 532 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 FIGNQ5HY92 759 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 DAAM2Q86T65 1068 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 SLC17A8Q8NDX2 589 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 DYDC2Q96IM9 177 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 ATP8A1Q9Y2Q0 1164 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 DOCK1Q14185 1865 aa12.67□□□□□ -0.38
PPP4R3B-204ENST00000612688 DNAH12Q6ZR08 3092 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 CYP3A7-CYP3A51PA0A087WV96 503 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 HMGB1P1B2RPK0 211 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 SART1O43290 800 aaKnown RBP12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 EVI5O60447 810 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 PRLRP16471 622 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 CYP3A7P24462 503 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 SLCO1A2P46721 670 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 UAP1Q16222 522 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 MEI1Q5TIA1 1274 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 METTL13Q8N6R0 699 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 RUBCNQ92622 972 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 ZNF570Q96NI8 536 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 NAP1L4Q99733 375 aaKnown RBP12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 TXNRD2Q9NNW7 524 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 GDF3Q9NR23 364 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 CEP72Q9P209 647 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 PNMA2Q9UL42 364 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 SPDYE5A6NIY4 337 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 FOXO6A8MYZ6 492 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 ATP9AO75110 1047 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 PGK2P07205 417 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 CDK17Q00537 523 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 PPATQ06203 517 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 MTMR1Q13613 665 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 PGM5Q15124 567 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 Q4G0T1 1027 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 SFR1Q86XK3 245 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 CCDC50Q8IVM0 306 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 USP38Q8NB14 1042 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 GLG1Q92896 1179 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 C12orf42Q96LP6 360 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 INPP4AQ96PE3 977 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 EIF2AK1Q9BQI3 630 aaKnown RBP12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 BHMT2Q9H2M3 363 aa12.66□□□□□ -0.38
PPP4R3B-204ENST00000612688 TCEAL9Q9UHQ7 104 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms