RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 HES2Q9Y543 173 aa19.92■□□□□ 0.78
SEMA3B-211ENST00000612509 SFI1A8K8P3 1242 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 CSPG5O95196 566 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 PBX3P40426 434 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 ATL3Q6DD88 541 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 HACE1Q8IYU2 909 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 SPIRE2Q8WWL2 714 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 ZNF558Q96NG5 402 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 APOL6Q9BWW8 343 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 TMEM134Q9H6X4 195 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 DAXXQ9UER7 740 aaPredicted RBP19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 USP20Q9Y2K6 914 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 ZDHHC9Q9Y397 364 aa19.91■□□□□ 0.78
SEMA3B-211ENST00000612509 SLC16A4O15374 487 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 FGF18O76093 207 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 KRT18P05783 430 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 PPM1AP35813 382 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 MLH1P40692 756 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 DNM1Q05193 864 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 SKIV2LQ15477 1246 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 RRAGBQ5VZM2 374 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 KCNT2Q6UVM3 1135 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 CCDC73Q6ZRK6 1079 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 TAS1R3Q7RTX0 852 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 SPPL3Q8TCT6 385 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 KCNG4Q8TDN1 519 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 ADPGKQ9BRR6 497 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 RNF39Q9H2S5 420 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 NSUN3Q9H649 340 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 UBN1Q9NPG3 1134 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 THEGQ9P2T0 379 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 ZMYM2Q9UBW7 1377 aa19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 TDRD15B5MCY1 1934 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-211ENST00000612509 A0A087X0B3 334 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 K7ERI5 159 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 INPPL1O15357 1258 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 CUTAO60888 179 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 ZC3H11AO75152 810 aaKnown RBP eCLIP19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 FAM13AO94988 1023 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 DNAJB1P25685 340 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 DDIT3P35638 169 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 AFF1P51825 1210 aaKnown RBP19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 ZNF131P52739 623 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 CAMK1Q14012 370 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 NT5DC1Q5TFE4 455 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 ATF7IP2Q5U623 682 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 EEF1DP3Q658K8 133 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 SLC17A8Q8NDX2 589 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 PRUNE2Q8WUY3 3088 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 POF1BQ8WVV4 589 aa19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 LARSQ9P2J5 1176 aaKnown RBP19.89■□□□□ 0.77
SEMA3B-211ENST00000612509 B4GALT3O60512 393 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 TBCAO75347 108 aaKnown RBP19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 STAT6P42226 847 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 SMTNP53814 917 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 UBE3AQ05086 875 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 RNASELQ05823 741 aaKnown RBP19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 GIT2Q14161 759 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 DCAF4L1Q3SXM0 396 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 TCEAL5Q5H9L2 206 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 SLC39A11Q8N1S5 342 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 TMEM161BQ8NDZ6 487 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 GAD1Q99259 594 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 NTPCRQ9BSD7 190 aaKnown RBP19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 MRPL4Q9BYD3 311 aaKnown RBP19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 NRDE2Q9H7Z3 1164 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 PARVGQ9HBI0 331 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 KCNG1Q9UIX4 513 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 CFAP45Q9UL16 551 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 GIT1Q9Y2X7 761 aa19.88■□□□□ 0.77
SEMA3B-211ENST00000612509 MYO7AQ13402 2215 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 ARL5CA6NH57 179 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 POMCP01189 267 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 MAPTP10636 758 aaKnown RBP19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 AKAP5P24588 427 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 NCKAP1LP55160 1127 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 BCAR1P56945 870 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 PLCB3Q01970 1234 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 AXDND1Q5T1B0 1012 aaPredicted RBP19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 SHC4Q6S5L8 630 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 ZFP42Q96MM3 310 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 GBP3Q9H0R5 595 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 KANSL3Q9P2N6 904 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 TNFSF13BQ9Y275 285 aa19.87■□□□□ 0.77
SEMA3B-211ENST00000612509 REV3LO60673 3130 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 CARNS1A5YM72 827 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 H0YCG3 227 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 K7ENM7 598 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 IRS1P35568 1242 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 ME1P48163 572 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 ALDH7A1P49419 539 aaKnown RBP19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 SCNN1GP51170 649 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 STRN3Q13033 797 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 SV2BQ7L1I2 683 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 ZNF280BQ86YH2 543 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 MYCT1Q8N699 235 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 PDILTQ8N807 584 aa19.86■□□□□ 0.77
SEMA3B-211ENST00000612509 MRPS27Q92552 414 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms