RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 NIPA1Q7RTP0 329 aa11.6□□□□□ -0.55
SSX3-204ENST00000612497 SMAP1Q8IYB5 467 aaPredicted RBP11.6□□□□□ -0.55
SSX3-204ENST00000612497 FDXACB1Q9BRP7 624 aaPredicted RBP11.6□□□□□ -0.55
SSX3-204ENST00000612497 ZNF577Q9BSK1 485 aa11.6□□□□□ -0.55
SSX3-204ENST00000612497 LNPKQ9C0E8 428 aa11.6□□□□□ -0.55
SSX3-204ENST00000612497 RSAD1Q9HA92 442 aa11.6□□□□□ -0.55
SSX3-204ENST00000612497 NRBP2Q9NSY0 501 aa11.6□□□□□ -0.55
SSX3-204ENST00000612497 MARCH5Q9NX47 278 aa11.6□□□□□ -0.55
SSX3-204ENST00000612497 PCDHA10Q9Y5I2 948 aa11.6□□□□□ -0.55
SSX3-204ENST00000612497 SOBPA7XYQ1 873 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 FAM86B1E9PN63 330 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 C1RP00736 705 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 OATP04181 439 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 CYP21A2P08686 494 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 FAM86B2P0C5J1 330 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 RXRAP19793 462 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 SREBF1P36956 1147 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 NAPAP54920 295 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 CDC42EP1Q00587 391 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 FZD5Q13467 585 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 DRP2Q13474 957 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 AASDHQ4L235 1098 aaPredicted RBP11.59□□□□□ -0.55
SSX3-204ENST00000612497 UNQ6494/PRO21346Q6UXR6 183 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 NFXL1Q6ZNB6 911 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 AGMOQ6ZNB7 445 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 CATSPER4Q7RTX7 472 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 B3GALT6Q96L58 329 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 INO80BQ9C086 356 aaPredicted RBP11.59□□□□□ -0.55
SSX3-204ENST00000612497 RIC8AQ9NPQ8 531 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 HEBP1Q9NRV9 189 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 TBC1D22BQ9NU19 505 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 NDRG2Q9UN36 371 aaKnown RBP11.59□□□□□ -0.55
SSX3-204ENST00000612497 POLIQ9UNA4 740 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 IGF2RP11717 2491 aa11.59□□□□□ -0.55
SSX3-204ENST00000612497 TDRD15B5MCY1 1934 aaKnown RBP11.58□□□□□ -0.55
SSX3-204ENST00000612497 GREB1Q4ZG55 1949 aa11.58□□□□□ -0.55
SSX3-204ENST00000612497 E7EWF7 191 aa11.58□□□□□ -0.56
SSX3-204ENST00000612497 RPL17P18621 184 aaKnown RBP11.58□□□□□ -0.56
SSX3-204ENST00000612497 ADCY7P51828 1080 aa11.58□□□□□ -0.56
SSX3-204ENST00000612497 ANTXR2P58335 489 aa11.58□□□□□ -0.56
SSX3-204ENST00000612497 LILRA6Q6PI73 481 aa11.58□□□□□ -0.56
SSX3-204ENST00000612497 COLGALT2Q8IYK4 626 aa11.58□□□□□ -0.56
SSX3-204ENST00000612497 RNF168Q8IYW5 571 aaPredicted RBP11.58□□□□□ -0.56
SSX3-204ENST00000612497 ITFG1Q8TB96 612 aa11.58□□□□□ -0.56
SSX3-204ENST00000612497 CHRDQ9H2X0 955 aa11.58□□□□□ -0.56
SSX3-204ENST00000612497 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.58□□□□□ -0.56
SSX3-204ENST00000612497 SETXQ7Z333 2677 aaKnown RBP11.58□□□□□ -0.56
SSX3-204ENST00000612497 CNTNAP2Q9UHC6 1331 aa11.58□□□□□ -0.56
SSX3-204ENST00000612497 CCDC69A6NI79 296 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 CCL16O15467 120 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 HRO43593 1189 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 ZNF862O60290 1169 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 NR1I2O75469 434 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 DNM2P50570 870 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 CCR3P51677 355 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 LIMK1P53667 647 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 PRKCEQ02156 737 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 SRSF5Q13243 272 aaKnown RBP11.57□□□□□ -0.56
SSX3-204ENST00000612497 PPM1LQ5SGD2 360 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 LIN9Q5TKA1 542 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 WWC2Q6AWC2 1192 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 MRPL10Q7Z7H8 261 aaKnown RBP11.57□□□□□ -0.56
SSX3-204ENST00000612497 RAB11FIP4Q86YS3 637 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 C12orf50Q8NA57 414 aaPredicted RBP11.57□□□□□ -0.56
SSX3-204ENST00000612497 IL25Q9H293 177 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 CHST7Q9NS84 486 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 FNIP2Q9P278 1114 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 TAF6LQ9Y6J9 622 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 NOTCH4Q99466 2003 aa11.57□□□□□ -0.56
SSX3-204ENST00000612497 NBEAQ8NFP9 2946 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 SPAG17Q6Q759 2223 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 IGLV3-22A0A075B6J6 115 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 WDR64B1ANS9 1081 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 CHURC1-FNTBB4DL54 471 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 F8W810 466 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 MAN2B1O00754 1011 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 TM4SF5O14894 197 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 EFEMP2O95967 443 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 HNRNPA1P09651 372 aaKnown RBP eCLIP11.56□□□□□ -0.56
SSX3-204ENST00000612497 CALM1P0DP23 149 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 CALM2P0DP24 149 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 CALM3P0DP25 149 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 CXCL12P48061 93 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 FNTBP49356 437 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 CREMQ03060 361 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 AP3B2Q13367 1082 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 SF3A2Q15428 464 aaKnown RBP11.56□□□□□ -0.56
SSX3-204ENST00000612497 USP41Q3LFD5 358 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 MTERF2Q49AM1 385 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 TYW1BQ6NUM6 668 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 CASC1Q6TDU7 716 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 MAMSTRQ6ZN01 415 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 ZNF410Q86VK4 478 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 RHPN2Q8IUC4 686 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 FAM160A2Q8N612 972 aaPredicted RBP11.56□□□□□ -0.56
SSX3-204ENST00000612497 KDF1Q8NAX2 398 aaPredicted RBP11.56□□□□□ -0.56
SSX3-204ENST00000612497 ING5Q8WYH8 240 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 NLRP4Q96MN2 994 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 IER2Q9BTL4 223 aa11.56□□□□□ -0.56
SSX3-204ENST00000612497 COLEC11Q9BWP8 271 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms