RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 ZZZ3Q8IYH5 903 aa4.77□□□□□ -1.65
CCDC144B-206ENST00000609959 SIMC1Q8NDZ2 872 aa4.77□□□□□ -1.65
CCDC144B-206ENST00000609959 CPEB1Q9BZB8 566 aaKnown RBP4.77□□□□□ -1.65
CCDC144B-206ENST00000609959 NCOA5Q9HCD5 579 aaKnown RBP4.77□□□□□ -1.65
CCDC144B-206ENST00000609959 SAMD15Q9P1V8 674 aa4.77□□□□□ -1.65
CCDC144B-206ENST00000609959 TLK1Q9UKI8 766 aa4.77□□□□□ -1.65
CCDC144B-206ENST00000609959 ARHGEF17Q96PE2 2063 aaPredicted RBP4.77□□□□□ -1.65
CCDC144B-206ENST00000609959 PTPDC1A2A3K4 754 aa4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 RAPGEF3O95398 923 aa4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 ESRRBO95718 433 aa4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 CASRP41180 1078 aa4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 DUSP2Q05923 314 aa4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 MPP3Q13368 585 aa4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 ZCCHC8Q6NZY4 707 aaKnown RBP4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 CPEB3Q8NE35 698 aaKnown RBP4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 DUSP26Q9BV47 211 aa4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 SPON1Q9HCB6 807 aa4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 RNF181Q9P0P0 153 aa4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 USP36Q9P275 1121 aaKnown RBP4.76□□□□□ -1.65
CCDC144B-206ENST00000609959 PLD2O14939 933 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 GLRX3O76003 335 aaKnown RBP4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 RBP3P10745 1247 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 XPAP23025 273 aaPredicted RBP4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 DDX6P26196 483 aaKnown RBP eCLIP4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 CTGFP29279 349 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 IGFALSP35858 605 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 RNASE9P60153 205 aaKnown RBP4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 NHLH2Q02577 135 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 DRICH1Q6PGQ1 229 aaPredicted RBP4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 PPP1R14CQ8TAE6 165 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 SMG7Q92540 1137 aaKnown RBP4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 DNAJC2Q99543 621 aaKnown RBP4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 LRFN3Q9BTN0 628 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 LSM14BQ9BX40 385 aaKnown RBP4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 PRDM13Q9H4Q3 707 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 DKK2Q9UBU2 259 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 TESQ9UGI8 421 aaKnown RBP4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 CHST2Q9Y4C5 530 aa4.75□□□□□ -1.65
CCDC144B-206ENST00000609959 KAT6AQ92794 2004 aa4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 MYADML2A6NDP7 307 aa4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 ZNF185O15231 689 aa4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 PTX3P26022 381 aaPredicted RBP4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 FOXI1Q12951 378 aa4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 SOGA3Q5TF21 947 aa4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 SP5Q6BEB4 398 aaPredicted RBP4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 SOX7Q9BT81 388 aa4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 MYL10Q9BUA6 226 aa4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 KANSL2Q9H9L4 492 aa4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 CDK11AQ9UQ88 783 aaPredicted RBP4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 FRMD4BQ9Y2L6 1034 aa4.74□□□□□ -1.65
CCDC144B-206ENST00000609959 ST20-MTHFSA0A0A6YYL1 179 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 LEFTY2O00292 366 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 NRP2O60462 931 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 DNAJC8O75937 253 aaPredicted RBP4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 ZSCAN20P17040 1043 aaPredicted RBP4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 FLT3P36888 993 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 KRTAP10-9P60411 292 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 CD69Q07108 199 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 SQSTM1Q13501 440 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 ZNF460Q14592 562 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 TAS1R1Q7RTX1 841 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 CDYL2Q8N8U2 506 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 PIK3C3Q8NEB9 887 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 OSBPL2Q9H1P3 480 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 KIAA1586Q9HCI6 787 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 POGKQ9P215 609 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 PCDHB6Q9Y5E3 794 aa4.73□□□□□ -1.65
CCDC144B-206ENST00000609959 MYPNQ86TC9 1320 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 UNC119BA6NIH7 251 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 B5MCH6 92 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 ASLP04424 464 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 SLC9A1P19634 815 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 PTH2RP49190 550 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 PTTG1IPP53801 180 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 NRG3P56975 720 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 EFCAB12Q6NXP0 572 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 UBE2R2Q712K3 238 aaPredicted RBP4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 GPRIN1Q7Z2K8 1008 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 XYLT1Q86Y38 959 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 FAM98AQ8NCA5 519 aaKnown RBP4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 POFUT1Q9H488 388 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 INTS7Q9NVH2 962 aaKnown RBP4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 B4GALT6Q9UBX8 382 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 SPO11Q9Y5K1 396 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 FPGT-TNNI3KV9GXZ4 949 aa4.72□□□□□ -1.65
CCDC144B-206ENST00000609959 OPA1O60313 960 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 PCDH8O95206 1070 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 LY86O95711 162 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 CFBP00751 764 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 FOSP01100 380 aaPredicted RBP4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 IGLV2-14P01704 120 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 CLEC2LP0C7M8 214 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 EGR2P11161 476 aaPredicted RBP4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 SDSP20132 328 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 APBA1Q02410 837 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 NHLH1Q02575 133 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 TP53BP2Q13625 1128 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 BMS1Q14692 1282 aaKnown RBP4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 SPDYE7PQ495Y7 208 aa4.71□□□□□ -1.66
CCDC144B-206ENST00000609959 FNDC3BQ53EP0 1204 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms