RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 CROCCP2Q86T23 111 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 VPS52Q8N1B4 723 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 CCDC89Q8N998 374 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 ATG4AQ8WYN0 398 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 INO80BQ9C086 356 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-216ENST00000608263 FAM49AQ9H0Q0 323 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-216ENST00000608263 RNF146Q9NTX7 359 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.1□□□□□ -0.63
CTCFL-216ENST00000608263 APEX2Q9UBZ4 518 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 PCDHAC2Q9Y5I4 1007 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 MYH2Q9UKX2 1941 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 EXOC1LA0A1B0GW35 172 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 TISP43B9A030 160 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 SLC8A1P32418 973 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 ADCY2Q08462 1091 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 TAF12Q16514 161 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 SPOUT1Q5T280 376 aaKnown RBP11.1□□□□□ -0.63
CTCFL-216ENST00000608263 RINT1Q6NUQ1 792 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 DNAJC19Q96DA6 116 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 ERP44Q9BS26 406 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 STK33Q9BYT3 514 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 TMBIM4Q9HC24 238 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 ALG13Q9NP73 1137 aaKnown RBP11.1□□□□□ -0.63
CTCFL-216ENST00000608263 FGFR1OP2Q9NVK5 253 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 INTUQ9ULD6 942 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 IQCA1LA6NCM1 817 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 DDX3XO00571 662 aaKnown RBP eCLIP11.09□□□□□ -0.631e-10■■□□□ 13.3
CTCFL-216ENST00000608263 FLT3P36888 993 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 ECE1P42892 770 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 ORC2Q13416 577 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-216ENST00000608263 SLMAPQ14BN4 828 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 FAM213AQ9BRX8 229 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 SEMA4AQ9H3S1 761 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 RAB20Q9NX57 234 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 HACL1Q9UJ83 578 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 SYNGAP1Q96PV0 1343 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 RASA4BC9J798 803 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 RASA4O43374 803 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 HUNKP57058 714 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 SCARA5Q6ZMJ2 495 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 PALM2Q8IXS6 379 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 LRRC34Q8IZ02 419 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 LRRC8CQ8TDW0 803 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 SAYSD1Q9NPB0 183 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 GPRC5CQ9NQ84 441 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 LRRD1A4D1F6 860 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 NPEPPSP55786 919 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 KRT17Q04695 432 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 SMAD1Q15797 465 aaKnown RBP11.09□□□□□ -0.63
CTCFL-216ENST00000608263 SLC10A5Q5PT55 438 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 HAUS6Q7Z4H7 955 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 SYT2Q8N9I0 419 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-216ENST00000608263 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 CPA5Q8WXQ8 436 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 CAVIN3Q969G5 261 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 MAK16Q9BXY0 300 aaKnown RBP11.09□□□□□ -0.63
CTCFL-216ENST00000608263 PITPNM3Q9BZ71 974 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 TTYH3Q9C0H2 523 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 PRR12Q9ULL5 1215 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 MYH8P13535 1937 aa11.09□□□□□ -0.63
CTCFL-216ENST00000608263 SETD1AO15047 1707 aaKnown RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 DDTLA6NHG4 134 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 RASSF10A6NK89 507 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 FAM86B1E9PN63 330 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 PODXLO00592 558 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 CALCAP01258 141 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 FAM86B2P0C5J1 330 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 ZNF844Q08AG5 666 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 ANKRD20A3Q5VUR7 823 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 FYB2Q5VWT5 728 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 SCYL2Q6P3W7 929 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 CYFIP1Q7L576 1253 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 RPAP3Q9H6T3 665 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 TAS2R14Q9NYV8 317 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 DCTN4Q9UJW0 460 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 DENND3A2RUS2 1198 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 TMEM150BA6NC51 233 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 EML1O00423 815 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 IFI35P80217 286 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 PPP2R5DQ14738 602 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 CEP55Q53EZ4 464 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 PLA2G4FQ68DD2 849 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 STMN2Q93045 179 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 ARHGEF26Q96DR7 871 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 POP1Q99575 1024 aaKnown RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 TMEM206Q9H813 350 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 AKT3Q9Y243 479 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 M0QZ92 97 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 DKC1O60832 514 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 ZNF157P51786 506 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 BYSLQ13895 437 aaKnown RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 STYK1Q6J9G0 422 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 APOBEC3FQ8IUX4 373 aaKnown RBP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 ACER1Q8TDN7 264 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 RSAD2Q8WXG1 361 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 FAM84AQ96KN4 292 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms