RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 F13A1P00488 732 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 ALDH2P05091 517 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 PLS3P13797 630 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 DNAJB1P25685 340 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 BCAR1P56945 870 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 PLCB3Q01970 1234 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 MAPK7Q13164 816 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 CAMK1Q14012 370 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 ARSHQ5FYA8 562 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 TCEAL5Q5H9L2 206 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 USP49Q70CQ1 688 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 CDR2LQ86X02 465 aaPredicted RBP18.25■□□□□ 0.51
LINC00240-203ENST00000606878 LINC00301Q8NCQ3 95 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 SPIRE2Q8WWL2 714 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 RAD54LQ92698 747 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 SYMPKQ92797 1274 aaKnown RBP18.25■□□□□ 0.51
LINC00240-203ENST00000606878 ADPGKQ9BRR6 497 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 BLOC1S4Q9NUP1 217 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 LZTS1Q9Y250 596 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 GIT1Q9Y2X7 761 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 HES2Q9Y543 173 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 ARID2Q68CP9 1835 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 SPTLC2O15270 562 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 KRT18P05783 430 aaKnown RBP18.24■□□□□ 0.51
LINC00240-203ENST00000606878 MCM6Q14566 821 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 RRAGBQ5VZM2 374 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 ATL3Q6DD88 541 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 PDE12Q6L8Q7 609 aaKnown RBP18.24■□□□□ 0.51
LINC00240-203ENST00000606878 APBB1IPQ7Z5R6 666 aaPredicted RBP18.24■□□□□ 0.51
LINC00240-203ENST00000606878 GPBP1Q86WP2 473 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 MRPS27Q92552 414 aaKnown RBP18.24■□□□□ 0.51
LINC00240-203ENST00000606878 ASB2Q96Q27 587 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 GAD1Q99259 594 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 APOL6Q9BWW8 343 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 NRDE2Q9H7Z3 1164 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 LARSQ9P2J5 1176 aaKnown RBP18.24■□□□□ 0.51
LINC00240-203ENST00000606878 PARP2Q9UGN5 583 aa18.24■□□□□ 0.51
LINC00240-203ENST00000606878 NPHP3-ACAD11A0A0J9YXS1 232 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 ARL5CA6NH57 179 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 TTLL13PA6NNM8 815 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 ZC3H11AO75152 810 aaKnown RBP eCLIP18.23■□□□□ 0.51
LINC00240-203ENST00000606878 PPP6R2O75170 966 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 CSPG5O95196 566 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 POMCP01189 267 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 GALTP07902 379 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 BECN1Q14457 450 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 FOXD4L6Q3SYB3 417 aaPredicted RBP18.23■□□□□ 0.51
LINC00240-203ENST00000606878 NT5DC1Q5TFE4 455 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 ATF7IP2Q5U623 682 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 FOXD4L3Q6VB84 417 aaPredicted RBP18.23■□□□□ 0.51
LINC00240-203ENST00000606878 CCDC73Q6ZRK6 1079 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 SLC39A11Q8N1S5 342 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 LARP4BQ92615 738 aaKnown RBP18.23■□□□□ 0.51
LINC00240-203ENST00000606878 GBP3Q9H0R5 595 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 PDZD7Q9H5P4 517 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 TLR9Q9NR96 1032 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 ARHGAP28Q9P2N2 729 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 STK17AQ9UEE5 414 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 CFAP45Q9UL16 551 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 ODF2LQ9ULJ1 636 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 USP20Q9Y2K6 914 aa18.23■□□□□ 0.51
LINC00240-203ENST00000606878 FNDC1Q4ZHG4 1894 aaPredicted RBP18.22■□□□□ 0.51
LINC00240-203ENST00000606878 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.22■□□□□ 0.51
LINC00240-203ENST00000606878 NT5C1B-RDH14C9J2C7 533 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 H0YCG3 227 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 INPPL1O15357 1258 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 SLC16A4O15374 487 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 YEATS4O95619 227 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 AKAP5P24588 427 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 PBX3P40426 434 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 AFF1P51825 1210 aaKnown RBP18.22■□□□□ 0.51
LINC00240-203ENST00000606878 ERVFC1P60507 584 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 BMS1Q14692 1282 aaKnown RBP18.22■□□□□ 0.51
LINC00240-203ENST00000606878 TJAP1Q5JTD0 557 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 EP400NLQ6ZTU2 488 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 ZNF280BQ86YH2 543 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 TMEM169Q96HH4 297 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 MRPL4Q9BYD3 311 aaKnown RBP18.22■□□□□ 0.51
LINC00240-203ENST00000606878 PANK2Q9BZ23 570 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 NXF3Q9H4D5 531 aaKnown RBP18.22■□□□□ 0.51
LINC00240-203ENST00000606878 TNFSF13BQ9Y275 285 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 FAN1Q9Y2M0 1017 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 BRWD1Q9NSI6 2320 aa18.22■□□□□ 0.51
LINC00240-203ENST00000606878 NR1I2O75469 434 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 DDHD2O94830 711 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 FAM13AO94988 1023 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 IRS1P35568 1242 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 MLH1P40692 756 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
LINC00240-203ENST00000606878 TFF2Q03403 129 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 STRN3Q13033 797 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 GIT2Q14161 759 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 DCAF4L1Q3SXM0 396 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 SV2BQ7L1I2 683 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 MYCT1Q8N699 235 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 LRRC15Q8TF66 581 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 PABPC5Q96DU9 382 aaKnown RBP18.21■□□□□ 0.51
LINC00240-203ENST00000606878 ACO2Q99798 780 aaKnown RBP18.21■□□□□ 0.51
LINC00240-203ENST00000606878 REEP2Q9BRK0 252 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 TMEM175Q9BSA9 504 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms