RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 MYL7Q01449 175 aa23.48■■□□□ 1.35
USP6NL-204ENST00000606752 PRKCZQ05513 592 aa23.48■■□□□ 1.35
USP6NL-204ENST00000606752 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.48■■□□□ 1.35
USP6NL-204ENST00000606752 USP37Q86T82 979 aa23.48■■□□□ 1.35
USP6NL-204ENST00000606752 REXO1L1PQ8IX06 675 aa23.48■■□□□ 1.35
USP6NL-204ENST00000606752 ZNF784Q8NCA9 323 aaPredicted RBP23.48■■□□□ 1.35
USP6NL-204ENST00000606752 PARD3BQ8TEW8 1205 aa23.48■■□□□ 1.35
USP6NL-204ENST00000606752 SYN2Q92777 582 aaPredicted RBP23.48■■□□□ 1.35
USP6NL-204ENST00000606752 C16orf45Q96MC5 204 aaPredicted RBP23.48■■□□□ 1.35
USP6NL-204ENST00000606752 FAM213AQ9BRX8 229 aa23.48■■□□□ 1.35
USP6NL-204ENST00000606752 NFKBIZQ9BYH8 718 aa23.48■■□□□ 1.35
USP6NL-204ENST00000606752 AGO2Q9UKV8 859 aaKnown RBP23.48■■□□□ 1.35
USP6NL-204ENST00000606752 ZNF233A6NK53 670 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 PMM2O15305 246 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 CYP24A1Q07973 514 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 PPP3CAQ08209 521 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 CETN1Q12798 172 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 PTPN14Q15678 1187 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 MARCH8Q5T0T0 291 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 TRIM65Q6PJ69 517 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 NYAP1Q6ZVC0 841 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 TRPV1Q8NER1 839 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 KAT2BQ92831 832 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 ZBTB45Q96K62 511 aaPredicted RBP23.47■■□□□ 1.35
USP6NL-204ENST00000606752 DESI2Q9BSY9 194 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 EPN1Q9Y6I3 576 aaPredicted RBP23.47■■□□□ 1.35
USP6NL-204ENST00000606752 MGAMO43451 1857 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 A0A0B4J269 797 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 DUSP11O75319 330 aaKnown RBP23.47■■□□□ 1.35
USP6NL-204ENST00000606752 LDHAP00338 332 aaKnown RBP23.47■■□□□ 1.35
USP6NL-204ENST00000606752 EDN1P05305 212 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 PRKCBP05771 671 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 CYBAP13498 195 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 KIAA0753Q2KHM9 967 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 CCDC170Q8IYT3 715 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 FZD8Q9H461 694 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 SIX2Q9NPC8 291 aa23.47■■□□□ 1.35
USP6NL-204ENST00000606752 MAP2K2P36507 400 aa23.46■■□□□ 1.35
USP6NL-204ENST00000606752 IRX5P78411 483 aaPredicted RBP23.46■■□□□ 1.35
USP6NL-204ENST00000606752 CCDC127Q96BQ5 260 aa23.46■■□□□ 1.35
USP6NL-204ENST00000606752 HAPLN2Q9GZV7 340 aa23.46■■□□□ 1.35
USP6NL-204ENST00000606752 NHEJ1Q9H9Q4 299 aaPredicted RBP23.46■■□□□ 1.35
USP6NL-204ENST00000606752 SETD4Q9NVD3 440 aa23.46■■□□□ 1.35
USP6NL-204ENST00000606752 AKT3Q9Y243 479 aa23.46■■□□□ 1.35
USP6NL-204ENST00000606752 NRCAMQ92823 1304 aa23.46■■□□□ 1.35
USP6NL-204ENST00000606752 GOLGA6L9A6NEM1 432 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 ACKR2O00590 384 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 TOM1L1O75674 476 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 NDUFA10O95299 355 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 GCLMP48507 274 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 FSCN1Q16658 493 aaKnown RBP23.45■■□□□ 1.34
USP6NL-204ENST00000606752 SFMBT2Q5VUG0 894 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 ACO2Q99798 780 aaKnown RBP23.45■■□□□ 1.34
USP6NL-204ENST00000606752 MSTO1Q9BUK6 570 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 ANKFY1Q9P2R3 1169 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 MYO6Q9UM54 1294 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 SIP14410 1827 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 TTLL13PA6NNM8 815 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 INO80B-WBP1J3KQ70 363 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 CLDN3O15551 220 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 TRPA1O75762 1119 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 TNNT1P13805 278 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 MATR3P43243 847 aaKnown RBP eCLIP23.45■■□□□ 1.349e-6■■■■□ 21.7
USP6NL-204ENST00000606752 PHKA2P46019 1235 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 MFSD10Q14728 455 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 IFNLR1Q8IU57 520 aaPredicted RBP23.45■■□□□ 1.34
USP6NL-204ENST00000606752 EHBP1Q8NDI1 1231 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 ZNF668Q96K58 619 aaPredicted RBP23.45■■□□□ 1.34
USP6NL-204ENST00000606752 MAP7D2Q96T17 732 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 INO80BQ9C086 356 aaPredicted RBP23.45■■□□□ 1.34
USP6NL-204ENST00000606752 INTS2Q9H0H0 1204 aaKnown RBP23.45■■□□□ 1.34
USP6NL-204ENST00000606752 IFT122Q9HBG6 1241 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 RNF186Q9NXI6 227 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 FHOD1Q9Y613 1164 aa23.45■■□□□ 1.34
USP6NL-204ENST00000606752 LRRIQ3A6PVS8 624 aaPredicted RBP23.44■■□□□ 1.34
USP6NL-204ENST00000606752 HAS3O00219 553 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 MYL3P08590 195 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 SMIM10L2AP0DMW4 78 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 SMIM10L2BP0DMW5 78 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 YY1P25490 414 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 GTF2H1P32780 548 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 CYLC1P35663 651 aaPredicted RBP23.44■■□□□ 1.34
USP6NL-204ENST00000606752 BEX3Q00994 111 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 CAP1Q01518 475 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 LMO3Q8TAP4 145 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 LMBR1Q8WVP7 490 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 TMEM117Q9H0C3 514 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 AIPL1Q9NZN9 384 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 ARHGAP20Q9P2F6 1191 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 DAAM1Q9Y4D1 1078 aa23.44■■□□□ 1.34
USP6NL-204ENST00000606752 KIF2AO00139 706 aaPredicted RBP23.43■■□□□ 1.34
USP6NL-204ENST00000606752 PSEN2P49810 448 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 MXI1P50539 228 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 NLRP11P59045 1033 aaKnown RBP23.43■■□□□ 1.34
USP6NL-204ENST00000606752 CHMP4BP1P59074 171 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 MBTD1Q05BQ5 628 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 NFRKBQ6P4R8 1299 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 CRELD2Q6UXH1 353 aaPredicted RBP23.43■■□□□ 1.34
USP6NL-204ENST00000606752 KIAA0319LQ8IZA0 1049 aa23.43■■□□□ 1.34
USP6NL-204ENST00000606752 CCDC42Q96M95 316 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms