RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 NDST4Q9H3R1 872 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 TMBIM4Q9HC24 238 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 IL1RAPL2Q9NP60 686 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 SLC39A2Q9NP94 309 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 LZTFL1Q9NQ48 299 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 GDF3Q9NR23 364 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 KLHL3Q9UH77 587 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 NFE2L3Q9Y4A8 694 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 PCDHA5Q9Y5H7 936 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 GMEB1Q9Y692 573 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 PTPRMP28827 1452 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 MLH3Q9UHC1 1453 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 DIP2AQ14689 1571 aa4.47□□□□□ -1.69
HMGB1P50-201ENST00000605814 WDR19Q8NEZ3 1342 aa4.46□□□□□ -1.69
HMGB1P50-201ENST00000605814 EDC4Q6P2E9 1401 aaKnown RBP4.46□□□□□ -1.69
HMGB1P50-201ENST00000605814 RGPD1P0DJD0 1748 aa4.46□□□□□ -1.69
HMGB1P50-201ENST00000605814 MED1Q15648 1581 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SPATA31D1Q6ZQQ2 1576 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 TMEM94Q12767 1356 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 CARMIL3Q8ND23 1372 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 A0A087WWV3 80 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 GOLGA6L10A0A0M3HER8 536 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 MYOCOSA0A1B0GUC4 107 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 A0A1W2PQC6 194 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PTPDC1A2A3K4 754 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 FAM83GA6ND36 823 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 F6X3S4 739 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 RNF8O76064 485 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 BAG3O95817 575 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 HMOX1P09601 288 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 HOXB7P09629 217 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 TCP1P17987 556 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PI3P19957 117 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 NR1D1P20393 614 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 RPL10P27635 214 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PDIA3P30101 505 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 CASP14P31944 242 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PIP4K2AP48426 406 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PLCD1P51178 756 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 VAV2P52735 878 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SH3BGRP55822 239 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 MRPS35P82673 323 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SRSF3P84103 164 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 AKAP17AQ02040 695 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 DEUP1Q05D60 604 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SPAG1Q07617 926 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PSMD2Q13200 908 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PDCLQ13371 301 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 LAMB3Q13751 1172 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 MTF1Q14872 753 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PABPC1LQ4VXU2 614 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 CFAP58Q5T655 872 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 HHATQ5VTY9 493 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SHC4Q6S5L8 630 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SLC4A10Q6U841 1118 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 RUFY4Q6ZNE9 571 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 DBX2Q6ZNG2 339 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SND1Q7KZF4 910 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PIGWQ7Z7B1 504 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 METTL16Q86W50 562 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 IFT20Q8IY31 132 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 CACNA2D3Q8IZS8 1091 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PARD3BQ8TEW8 1205 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 HDAC7Q8WUI4 952 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 TBC1D31Q96DN5 1066 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZBTB10Q96DT7 871 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 IQCDQ96DY2 449 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 RBM41Q96IZ5 413 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 C20orf173Q96LM9 149 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 AGAP3Q96P47 875 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 MED15Q96RN5 788 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 CDC5LQ99459 802 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 TSC22D3Q99576 134 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 DESI2Q9BSY9 194 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC28BQ9BUN5 200 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 DSCC1Q9BVC3 393 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 CCDC134Q9H6E4 229 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZNF552Q9H707 407 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 PLCB1Q9NQ66 1216 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 CWC25Q9NXE8 425 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 WDR35Q9P2L0 1181 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SWAP70Q9UH65 585 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SLC12A6Q9UHW9 1150 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 MAN1B1Q9UKM7 699 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 BLOC1S6Q9UL45 172 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 RPL26L1Q9UNX3 145 aaKnown RBP4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SLC12A4Q9UP95 1085 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 CLIC4Q9Y696 253 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 SLC4A7Q9Y6M7 1214 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 MYH13Q9UKX3 1938 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 UTYO14607 1347 aa4.46□□□□□ -1.7
HMGB1P50-201ENST00000605814 FAM208AQ9UK61 1670 aaKnown RBP4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ABCC12Q96J65 1359 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 LRRD1A4D1F6 860 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ZNF233A6NK53 670 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 KRT86O43790 486 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 ORC4O43929 436 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 FLOT1O75955 427 aa4.45□□□□□ -1.7
HMGB1P50-201ENST00000605814 NDUFA10O95299 355 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms