RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ENTPD7Q9NQZ7 604 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 LARSQ9P2J5 1176 aaKnown RBP12.73□□□□□ -0.37
CCDC12-209ENST00000604164 ODF2LQ9ULJ1 636 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 SRPRBQ9Y5M8 271 aaKnown RBP12.73□□□□□ -0.37
CCDC12-209ENST00000604164 CLIC4Q9Y696 253 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 TRANK1O15050 2925 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 ARL5CA6NH57 179 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 B4GALT5O43286 388 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 NPTXRO95502 500 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 PLS3P13797 630 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 LIG1P18858 919 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 KCNA5P22460 613 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 DNAJB1P25685 340 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 NPTX2P47972 431 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 SLC12A3P55017 1021 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 TFF2Q03403 129 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 STRN3Q13033 797 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 CAMK1Q14012 370 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 SMC1AQ14683 1233 aaKnown RBP12.72□□□□□ -0.37
CCDC12-209ENST00000604164 PTPAQ15257 358 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 TMC7Q7Z402 723 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 KCNK18Q7Z418 384 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 KRI1Q8N9T8 703 aaKnown RBP12.72□□□□□ -0.37
CCDC12-209ENST00000604164 TMEM87AQ8NBN3 555 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 SPIRE2Q8WWL2 714 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 RPS6KC1Q96S38 1066 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 PLIN2Q99541 437 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 TCF25Q9BQ70 676 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 NTPCRQ9BSD7 190 aaKnown RBP12.72□□□□□ -0.37
CCDC12-209ENST00000604164 RUSC1Q9BVN2 902 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 COL25A1Q9BXS0 654 aaPredicted RBP12.72□□□□□ -0.37
CCDC12-209ENST00000604164 MRPL4Q9BYD3 311 aaKnown RBP12.72□□□□□ -0.37
CCDC12-209ENST00000604164 GBP3Q9H0R5 595 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 NRDE2Q9H7Z3 1164 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 TLE6Q9H808 572 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 STK17AQ9UEE5 414 aa12.72□□□□□ -0.37
CCDC12-209ENST00000604164 MEIS3P2A8K0S8 358 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 FSCN2O14926 492 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 CSPG5O95196 566 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 KRT18P05783 430 aaKnown RBP12.71□□□□□ -0.37
CCDC12-209ENST00000604164 GALTP07902 379 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 MARCKSP29966 332 aaPredicted RBP12.71□□□□□ -0.37
CCDC12-209ENST00000604164 HYAL1Q12794 435 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 SLC39A14Q15043 492 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 CTC1Q2NKJ3 1217 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 ATF7IP2Q5U623 682 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 ATL3Q6DD88 541 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 DDX53Q86TM3 631 aaKnown RBP12.71□□□□□ -0.37
CCDC12-209ENST00000604164 EFHBQ8N7U6 833 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 ADAMTS19Q8TE59 1207 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 RAD54LQ92698 747 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 IGSF21Q96ID5 467 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 APOL6Q9BWW8 343 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 NXF3Q9H4D5 531 aaKnown RBP12.71□□□□□ -0.37
CCDC12-209ENST00000604164 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 IGFLR1Q9H665 355 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 ARHGAP28Q9P2N2 729 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 PARP2Q9UGN5 583 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 FAN1Q9Y2M0 1017 aa12.71□□□□□ -0.37
CCDC12-209ENST00000604164 KIAA1671Q9BY89 1806 aa12.71□□□□□ -0.38
CCDC12-209ENST00000604164 TBCAO75347 108 aaKnown RBP12.7□□□□□ -0.38
CCDC12-209ENST00000604164 POMCP01189 267 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 BMP1P13497 986 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 PLCG1P19174 1290 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 IRS1P35568 1242 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 DDIT3P35638 169 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 PBX3P40426 434 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 MLH1P40692 756 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 NRIP1P48552 1158 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 NASPP49321 788 aaPredicted RBP12.7□□□□□ -0.38
CCDC12-209ENST00000604164 NDUFV1P49821 464 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 CEBPZQ03701 1054 aaKnown RBP12.7□□□□□ -0.38
CCDC12-209ENST00000604164 GRIK3Q13003 919 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 ADAM15Q13444 863 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 KARSQ15046 597 aaKnown RBP12.7□□□□□ -0.38
CCDC12-209ENST00000604164 STK38Q15208 465 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 GPBP1Q86WP2 473 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 DAW1Q8N136 415 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 LARP4BQ92615 738 aaKnown RBP12.7□□□□□ -0.38
CCDC12-209ENST00000604164 UHRF1Q96T88 793 aaPredicted RBP12.7□□□□□ -0.38
CCDC12-209ENST00000604164 GAD1Q99259 594 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 KIFC3Q9BVG8 833 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 COLEC11Q9BWP8 271 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 FBXO2Q9UK22 296 aaPredicted RBP12.7□□□□□ -0.38
CCDC12-209ENST00000604164 TNFSF13BQ9Y275 285 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 SSX2IPQ9Y2D8 614 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 HES2Q9Y543 173 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 EYSQ5T1H1 3165 aa12.7□□□□□ -0.38
CCDC12-209ENST00000604164 SLC16A4O15374 487 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 FAM13AO94988 1023 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 YEATS4O95619 227 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 ZSCAN22P10073 491 aaPredicted RBP12.69□□□□□ -0.38
CCDC12-209ENST00000604164 SLC11A1P49279 550 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 KCNQ1P51787 676 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 YARSP54577 528 aaKnown RBP12.69□□□□□ -0.38
CCDC12-209ENST00000604164 ERVFC1P60507 584 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 MAPK7Q13164 816 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 DUSP6Q16828 381 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms