RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 GTF2F1P35269 517 aaKnown RBP eCLIP24.15■■□□□ 1.46
PPFIA3-208ENST00000602726 TMEM119Q4V9L6 283 aa24.15■■□□□ 1.46
PPFIA3-208ENST00000602726 ADGRD2Q7Z7M1 963 aa24.15■■□□□ 1.46
PPFIA3-208ENST00000602726 RBM23Q86U06 439 aaKnown RBP24.15■■□□□ 1.46
PPFIA3-208ENST00000602726 TMEM169Q96HH4 297 aa24.15■■□□□ 1.46
PPFIA3-208ENST00000602726 FAM193BQ96PV7 902 aaPredicted RBP24.15■■□□□ 1.46
PPFIA3-208ENST00000602726 UHRF1Q96T88 793 aaPredicted RBP24.15■■□□□ 1.46
PPFIA3-208ENST00000602726 TIPINQ9BVW5 301 aa24.15■■□□□ 1.46
PPFIA3-208ENST00000602726 RNF39Q9H2S5 420 aa24.15■■□□□ 1.46
PPFIA3-208ENST00000602726 CCDC169A6NNP5 214 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 H3BQ06 376 aaPredicted RBP24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 POMCP01189 267 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 PLA2G4BP0C869 781 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 NRIP1P48552 1158 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 AFF1P51825 1210 aaKnown RBP24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 PEX3P56589 373 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 CTC1Q2NKJ3 1217 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 FAM173BQ6P4H8 233 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 ZNF280BQ86YH2 543 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 SYT2Q8N9I0 419 aaPredicted RBP24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 RASSF8Q8NHQ8 419 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 TCF25Q9BQ70 676 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 CCDC113Q9H0I3 377 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 NXF3Q9H4D5 531 aaKnown RBP24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 ZSCAN16Q9H4T2 348 aaPredicted RBP24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 TLE6Q9H808 572 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 ENTPD7Q9NQZ7 604 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 GIT1Q9Y2X7 761 aa24.14■■□□□ 1.45
PPFIA3-208ENST00000602726 ARL5CA6NH57 179 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 K7ERI5 159 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 FSCN2O14926 492 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 N4BP3O15049 544 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 GALTP07902 379 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 GUCY2CP25092 1073 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 MLH1P40692 756 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 GRIN1Q05586 938 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 DMP1Q13316 513 aaPredicted RBP24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 PLPP4Q5VZY2 271 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 TMC7Q7Z402 723 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 DAW1Q8N136 415 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 GAD1Q99259 594 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 PDZD7Q9H5P4 517 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 NGRNQ9NPE2 291 aaKnown RBP24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 DNAJB4Q9UDY4 337 aa24.13■■□□□ 1.45
PPFIA3-208ENST00000602726 TTLL13PA6NNM8 815 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 DDHD2O94830 711 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 AKAP5P24588 427 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 NPTX2P47972 431 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 SLC11A1P49279 550 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 SLC12A3P55017 1021 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 CEBPZQ03701 1054 aaKnown RBP24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 RAD51AP2Q09MP3 1159 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 ADAM15Q13444 863 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 PTPAQ15257 358 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 PUS10Q3MIT2 529 aaKnown RBP24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 EFHBQ8N7U6 833 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 ADPGKQ9BRR6 497 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 C17orf75Q9HAS0 396 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 KCND2Q9NZV8 630 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 PARP2Q9UGN5 583 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 USP20Q9Y2K6 914 aa24.12■■□□□ 1.45
PPFIA3-208ENST00000602726 BDP1A6H8Y1 2624 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 PER2O15055 1255 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 LINC01565O15544 149 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 ALDH2P05091 517 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 MARCKSP29966 332 aaPredicted RBP24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 LTBRP36941 435 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 MAPK7Q13164 816 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 BMS1Q14692 1282 aaKnown RBP24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 PTCRAQ6ISU1 281 aaPredicted RBP24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 IGSF21Q96ID5 467 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 ZFP42Q96MM3 310 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 TMEM175Q9BSA9 504 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 KMT5AQ9NQR1 393 aa24.11■■□□□ 1.45
PPFIA3-208ENST00000602726 SFI1A8K8P3 1242 aa24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 INPPL1O15357 1258 aa24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 B4GALT3O60512 393 aa24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 NDUFV1P49821 464 aa24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 SCNN1GP51170 649 aa24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 KARSQ15046 597 aaKnown RBP24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 TMEM173Q86WV6 379 aaPredicted RBP24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 NECAB3Q96P71 396 aaPredicted RBP24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 CDCA3Q99618 268 aaPredicted RBP24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 KCNG1Q9UIX4 513 aa24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 FAN1Q9Y2M0 1017 aa24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 RBM19Q9Y4C8 960 aaKnown RBP24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 PHLPP2Q6ZVD8 1323 aa24.1■■□□□ 1.45
PPFIA3-208ENST00000602726 FSD2A1L4K1 749 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 EDN1P05305 212 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 PLCG1P19174 1290 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 CA8P35219 290 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 DLX2Q07687 328 aaPredicted RBP24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 SMC1AQ14683 1233 aaKnown RBP24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 DUSP6Q16828 381 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 NT5DC1Q5TFE4 455 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 ATF7IP2Q5U623 682 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 VPS52Q8N1B4 723 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 TMEM134Q9H6X4 195 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 KLK14Q9P0G3 267 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms