RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 RNF39Q9H2S5 420 aa16.84■□□□□ 0.29
SMG9-213ENST00000602222 CDH22Q9UJ99 828 aa16.84■□□□□ 0.29
SMG9-213ENST00000602222 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
SMG9-213ENST00000602222 CACNA1HO95180 2353 aa16.84■□□□□ 0.29
SMG9-213ENST00000602222 INO80B-WBP1J3KQ70 363 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 SEC24BO95487 1268 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 SPATA31C1P0DKV0 1188 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 ARF4P18085 180 aaPredicted RBP16.83■□□□□ 0.28
SMG9-213ENST00000602222 NHLH1Q02575 133 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 ORC2Q13416 577 aaPredicted RBP16.83■□□□□ 0.28
SMG9-213ENST00000602222 SAFBQ15424 915 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMG9-213ENST00000602222 RARS2Q5T160 578 aaKnown RBP16.83■□□□□ 0.28
SMG9-213ENST00000602222 RNF168Q8IYW5 571 aaPredicted RBP16.83■□□□□ 0.28
SMG9-213ENST00000602222 FBXL6Q8N531 539 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 PIGOQ8TEQ8 1089 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 CPB2Q96IY4 423 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 KLHL5Q96PQ7 755 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 LLPHQ9BRT6 129 aaKnown RBP16.83■□□□□ 0.28
SMG9-213ENST00000602222 EMILIN2Q9BXX0 1053 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 TUFT1Q9NNX1 390 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 LIMCH1Q9UPQ0 1083 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 USTQ9Y2C2 406 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 GIT1Q9Y2X7 761 aa16.83■□□□□ 0.28
SMG9-213ENST00000602222 ZMYM2Q9UBW7 1377 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 ARL5CA6NH57 179 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 POTEMA6NI47 508 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 C2CD4DB7Z1M9 353 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 SOD2P04179 222 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 CNPP09543 421 aaKnown RBP16.82■□□□□ 0.28
SMG9-213ENST00000602222 CLCN4P51793 760 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 CABP7Q86V35 215 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 ZDHHC14Q8IZN3 488 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 C12orf76Q8N812 135 aaPredicted RBP16.82■□□□□ 0.28
SMG9-213ENST00000602222 CCDC43Q96MW1 224 aaKnown RBP16.82■□□□□ 0.28
SMG9-213ENST00000602222 GAD1Q99259 594 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 PRRX2Q99811 253 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 POLR3CQ9BUI4 534 aaPredicted RBP16.82■□□□□ 0.28
SMG9-213ENST00000602222 POLR3FQ9H1D9 316 aaPredicted RBP16.82■□□□□ 0.28
SMG9-213ENST00000602222 MRPL17Q9NRX2 175 aaKnown RBP16.82■□□□□ 0.28
SMG9-213ENST00000602222 MARCH5Q9NX47 278 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 MIOSQ9NXC5 875 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 DBR1Q9UK59 544 aaKnown RBP16.82■□□□□ 0.28
SMG9-213ENST00000602222 SSX2IPQ9Y2D8 614 aa16.82■□□□□ 0.28
SMG9-213ENST00000602222 A0A1B0GUA9 196 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 MCM7P33993 719 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 FOSBP53539 338 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 PPP4R3CPQ6ZMV5 832 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 GPR149Q86SP6 731 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 CATSPER3Q86XQ3 398 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 SUGP1Q8IWZ8 645 aaKnown RBP16.81■□□□□ 0.28
SMG9-213ENST00000602222 UBALD2Q8IYN6 164 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 HACE1Q8IYU2 909 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 MCPH1Q8NEM0 835 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 NACC1Q96RE7 527 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 HERC2P3Q9BVR0 1158 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 FOXP1Q9H334 677 aaPredicted RBP16.81■□□□□ 0.28
SMG9-213ENST00000602222 SFXN1Q9H9B4 322 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 HES2Q9Y543 173 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 ARID2Q68CP9 1835 aa16.81■□□□□ 0.28
SMG9-213ENST00000602222 A0A087WWV3 80 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 USO1O60763 962 aaKnown RBP16.8■□□□□ 0.28
SMG9-213ENST00000602222 MED24O75448 989 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 C1RP00736 705 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 WEE2P0C1S8 567 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 SP100P23497 879 aaPredicted RBP16.8■□□□□ 0.28
SMG9-213ENST00000602222 KLRC2P26717 231 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 MLH1P40692 756 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 FAM187BQ17R55 369 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 CDCA2Q69YH5 1023 aaPredicted RBP16.8■□□□□ 0.28
SMG9-213ENST00000602222 KANK3Q6NY19 840 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 SLC27A1Q6PCB7 646 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 ALYREFQ86V81 257 aaKnown RBP16.8■□□□□ 0.28
SMG9-213ENST00000602222 GPR65Q8IYL9 337 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 PLCD3Q8N3E9 789 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 KREMEN2Q8NCW0 462 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 GSTCDQ8NEC7 633 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 C8orf76Q96K31 380 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 PRIMPOLQ96LW4 560 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 ZFP42Q96MM3 310 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 RPS6KC1Q96S38 1066 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 TRIM6Q9C030 488 aaPredicted RBP16.8■□□□□ 0.28
SMG9-213ENST00000602222 RXFP1Q9HBX9 757 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 SORCS3Q9UPU3 1222 aa16.8■□□□□ 0.28
SMG9-213ENST00000602222 PRG3Q9Y2Y8 225 aaPredicted RBP16.8■□□□□ 0.28
SMG9-213ENST00000602222 WDFY4Q6ZS81 3184 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 MYO10Q9HD67 2058 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 B4GALT5O43286 388 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 NR1I2O75469 434 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 SSBP05455 408 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMG9-213ENST00000602222 URODP06132 367 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 ATP2B1P20020 1258 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 MUTP22033 750 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 RPA1P27694 616 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 OR1G1P47890 313 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 SCNN1GP51170 649 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 GUCY1B3Q02153 619 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 IER5LQ5T953 404 aa16.79■□□□□ 0.28
SMG9-213ENST00000602222 KIAA0319Q5VV43 1072 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms