RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 PLA2G4FQ68DD2 849 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 ECHDC2Q86YB7 292 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 KSR1Q8IVT5 923 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 ADSSL1Q8N142 457 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 TMEM105Q8N8V8 129 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 COLGALT1Q8NBJ5 622 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 VN1R2Q8NFZ6 395 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 ERMNQ8TAM6 284 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 PIGOQ8TEQ8 1089 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 FAM167AQ96KS9 214 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 RIPOR3Q96MK2 946 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 NACC1Q96RE7 527 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 PHF7Q9BWX1 381 aaPredicted RBP9.71□□□□□ -0.86
TRIM28-214ENST00000600840 PANK2Q9BZ23 570 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 C1orf112Q9NSG2 853 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 NRBP2Q9NSY0 501 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 DDX19AQ9NUU7 478 aaKnown RBP9.71□□□□□ -0.86
TRIM28-214ENST00000600840 KBTBD4Q9NVX7 518 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 TMEM161AQ9NX61 479 aa9.71□□□□□ -0.86
TRIM28-214ENST00000600840 ZFHX2Q9C0A1 2572 aaPredicted RBP9.71□□□□□ -0.86
TRIM28-214ENST00000600840 TRIOO75962 3097 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 CACNA1HO95180 2353 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 MEIS3P2A8K0S8 358 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 ACTN4O43707 911 aaKnown RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 FGF18O76093 207 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 DARSP14868 501 aaKnown RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 LIG1P18858 919 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 YWHABP31946 246 aaKnown RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 DEKP35659 375 aaKnown RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 SLC12A3P55017 1021 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 UBE2HP62256 183 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 COASYQ13057 564 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 NFKBIBQ15653 356 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 LONRF3Q496Y0 759 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 CLLU1OSQ5K130 101 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 SPOUT1Q5T280 376 aaKnown RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 HAUS3Q68CZ6 603 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 C1orf186Q6ZWK4 172 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 ZNF598Q86UK7 904 aaKnown RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 EFHBQ8N7U6 833 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 SYT2Q8N9I0 419 aaPredicted RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 PLIN2Q99541 437 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 NT5C3AQ9H0P0 336 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 SMOC2Q9H3U7 446 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 DHX33Q9H6R0 707 aaKnown RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 ELAC1Q9H777 363 aaKnown RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 ATP6V0A4Q9HBG4 840 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 XPNPEP1Q9NQW7 623 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 SEPT9Q9UHD8 586 aaPredicted RBP9.7□□□□□ -0.86
TRIM28-214ENST00000600840 TCEAL9Q9UHQ7 104 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 KCNH3Q9ULD8 1083 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 SPTBN4Q9H254 2564 aa9.7□□□□□ -0.86
TRIM28-214ENST00000600840 A0A087WZ62 844 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 FSCN2O14926 492 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 POLR2DO15514 142 aaKnown RBP9.69□□□□□ -0.86
TRIM28-214ENST00000600840 DKC1O60832 514 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRIM28-214ENST00000600840 MAFO75444 373 aaPredicted RBP9.69□□□□□ -0.86
TRIM28-214ENST00000600840 TBC1D8BQ0IIM8 1120 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 MAPK7Q13164 816 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 MCM6Q14566 821 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 ARID2Q68CP9 1835 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 CNNM4Q6P4Q7 775 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 ELOA2Q8IYF1 753 aaPredicted RBP9.69□□□□□ -0.86
TRIM28-214ENST00000600840 DAW1Q8N136 415 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 FSIP1Q8NA03 581 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 RNF169Q8NCN4 708 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 MRPS27Q92552 414 aaKnown RBP9.69□□□□□ -0.86
TRIM28-214ENST00000600840 RAD54LQ92698 747 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 NKD2Q969F2 451 aaPredicted RBP9.69□□□□□ -0.86
TRIM28-214ENST00000600840 DNAJC19Q96DA6 116 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 RMDN1Q96DB5 314 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 GBP4Q96PP9 640 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 MAP7D2Q96T17 732 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 FDXACB1Q9BRP7 624 aaPredicted RBP9.69□□□□□ -0.86
TRIM28-214ENST00000600840 CYP26B1Q9NR63 512 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 SERTAD1Q9UHV2 236 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 DNM3Q9UQ16 869 aa9.69□□□□□ -0.86
TRIM28-214ENST00000600840 DCHS1Q96JQ0 3298 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 A0A0U1RQF3 1178 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 MYMKA6NI61 221 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 HIDE1A8MVS5 230 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 NT5C1B-RDH14C9J2C7 533 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 B4GALT3O60512 393 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 NR1I2O75469 434 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 ZNF202O95125 648 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 PLA2G4BP0C869 781 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 CYP11B2P19099 503 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 TMOD1P28289 359 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 FAM160A1Q05DH4 1040 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 KCNC3Q14003 757 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 ODR4Q5SWX8 454 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 RRAGBQ5VZM2 374 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 PLPP4Q5VZY2 271 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 RINT1Q6NUQ1 792 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 KCNT2Q6UVM3 1135 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 CCDC73Q6ZRK6 1079 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 OTUD6AQ7L8S5 288 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 ZBTB33Q86T24 672 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms