RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 KCNMB3Q9NPA1 279 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 MAN1C1Q9NR34 630 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 MRPL17Q9NRX2 175 aaKnown RBP6.85□□□□□ -1.31
VRK3-220ENST00000600259 KANSL3Q9P2N6 904 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 STK39Q9UEW8 545 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 TCEAL9Q9UHQ7 104 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 NAP1L2Q9ULW6 460 aaPredicted RBP6.85□□□□□ -1.31
VRK3-220ENST00000600259 PCDHA4Q9UN74 947 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 COL4A3BPQ9Y5P4 624 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 DNAH14Q0VDD8 3507 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 WDR81Q562E7 1941 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 DENND4AQ7Z401 1863 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 MED19A0JLT2 244 aaPredicted RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 ARL5CA6NH57 179 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 GAS2O43903 313 aaKnown RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 LMNAP02545 664 aaKnown RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 P4HBP07237 508 aaKnown RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 CFHP08603 1231 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 SPATA31D3P0C874 917 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 SRGAP2CP0DJJ0 459 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 MYBP10242 640 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 SRFP11831 508 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 LAMP2P13473 410 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 QARSP47897 775 aaKnown RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 AK2P54819 239 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 NLRP5P59047 1200 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 PTENP60484 403 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 CCT2P78371 535 aaKnown RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 PPP2R5CQ13362 524 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 TOB2Q14106 344 aaPredicted RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 SPATA31D4Q6ZUB0 917 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 FERMT3Q86UX7 667 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 IFNLR1Q8IU57 520 aaPredicted RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 C4orf19Q8IY42 314 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 BLIDQ8IZY5 108 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 SUMF1Q8NBK3 374 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 CCDC148Q8NFR7 591 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 URGCPQ8TCY9 931 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 JAKMIP1Q96N16 626 aaKnown RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 AIFM3Q96NN9 605 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 GAD1Q99259 594 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 JPH2Q9BR39 696 aaPredicted RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 RPP25Q9BUL9 199 aaKnown RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 C22orf23Q9BZE7 217 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 GPR62Q9BZJ7 368 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 TBC1D17Q9HA65 648 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 XPNPEP1Q9NQW7 623 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 SLC2A4RGQ9NR83 387 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 RGL1Q9NZL6 768 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 FNIP2Q9P278 1114 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 FBXL21Q9UKT6 434 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 PRG3Q9Y2Y8 225 aaPredicted RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 PPME1Q9Y570 386 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 IPPQ9Y573 584 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 R4GN57 208 aa6.84□□□□□ -1.31
VRK3-220ENST00000600259 TPRP12270 2363 aaKnown RBP6.84□□□□□ -1.31
VRK3-220ENST00000600259 CACNA1IQ9P0X4 2223 aa6.84□□□□□ -1.32
VRK3-220ENST00000600259 CLUHO75153 1309 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 POTEMA6NI47 508 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 C2CD2LO14523 706 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 ASAP2O43150 1006 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 TGM5O43548 720 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 TSPAN1O60635 241 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 LRRN2O75325 713 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 SLITRK3O94933 977 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 GLUD1P00367 558 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 URODP06132 367 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 ADH1AP07327 375 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 DCNP07585 359 aaKnown RBP6.83□□□□□ -1.32
VRK3-220ENST00000600259 SP9P0CG40 484 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 ITGA4P13612 1032 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 RFC5P40937 340 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 GLUD2P49448 558 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 SCNN1GP51170 649 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 STARD6P59095 220 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 GPC5P78333 572 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 AKAP17AQ02040 695 aaKnown RBP6.83□□□□□ -1.32
VRK3-220ENST00000600259 POU5F1BQ06416 359 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 SPIRE1Q08AE8 756 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 HTR4Q13639 388 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 EPHA7Q15375 998 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 INF2Q27J81 1249 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 PPP4R3AQ6IN85 833 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 BLOC1S2Q6QNY1 142 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 POTEHQ6S545 545 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 PALB2Q86YC2 1186 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 CNNM3Q8NE01 707 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 ST13P5Q8NFI4 369 aaPredicted RBP6.83□□□□□ -1.32
VRK3-220ENST00000600259 GPR152Q8TDT2 470 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 PSPC1Q8WXF1 523 aaKnown RBP6.83□□□□□ -1.32
VRK3-220ENST00000600259 SMG7Q92540 1137 aaKnown RBP6.83□□□□□ -1.32
VRK3-220ENST00000600259 CEP170P1Q96L14 293 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 B3GALT6Q96L58 329 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 FAM20AQ96MK3 541 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 ZFP42Q96MM3 310 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 FAM193BQ96PV7 902 aaPredicted RBP6.83□□□□□ -1.32
VRK3-220ENST00000600259 DDX23Q9BUQ8 820 aaKnown RBP6.83□□□□□ -1.32
VRK3-220ENST00000600259 PRKD2Q9BZL6 878 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 CSRNP2Q9H175 543 aa6.83□□□□□ -1.32
VRK3-220ENST00000600259 PLEKHA4Q9H4M7 779 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms