RNA–Protein interactions for RNA: ENST00000599551.5

UBA52-213, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBA52, Length 707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-213ENST00000599551 MARCH5Q9NX47 278 aa13.18□□□□□ -0.3
UBA52-213ENST00000599551 PRG3Q9Y2Y8 225 aaPredicted RBP13.18□□□□□ -0.3
UBA52-213ENST00000599551 MSH4O15457 936 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 NR1I2O75469 434 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 POMCP01189 267 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 OR1G1P47890 313 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 CREMQ03060 361 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 RSPO2Q6UXX9 243 aaPredicted RBP13.17□□□□□ -0.3
UBA52-213ENST00000599551 COLGALT2Q8IYK4 626 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 GPR65Q8IYL9 337 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 CNNM3Q8NE01 707 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 SLC5A5Q92911 643 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 CEP89Q96ST8 783 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
UBA52-213ENST00000599551 LSG1Q9H089 658 aaKnown RBP13.17□□□□□ -0.3
UBA52-213ENST00000599551 EPC1Q9H2F5 836 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 UNC45AQ9H3U1 944 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 ZSCAN32Q9NX65 697 aa13.17□□□□□ -0.3
UBA52-213ENST00000599551 SMG5Q9UPR3 1016 aaKnown RBP13.17□□□□□ -0.3
UBA52-213ENST00000599551 CACNA1GO43497 2377 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 GAS2O43903 313 aaKnown RBP13.16□□□□□ -0.3
UBA52-213ENST00000599551 LRRN2O75325 713 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 MAFO75444 373 aaPredicted RBP13.16□□□□□ -0.3
UBA52-213ENST00000599551 EFEMP2O95967 443 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 MYBP10242 640 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
UBA52-213ENST00000599551 FSHRP23945 695 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 AFF1P51825 1210 aaKnown RBP13.16□□□□□ -0.3
UBA52-213ENST00000599551 GPC5P78333 572 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 PFKPQ01813 784 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 UBXN2BQ14CS0 331 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 MLF2Q15773 248 aaPredicted RBP13.16□□□□□ -0.3
UBA52-213ENST00000599551 ST3GAL2Q16842 350 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 MTSS1LQ765P7 747 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 TAS1R1Q7RTX1 841 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 MIER3Q7Z3K6 550 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 IFT122Q9HBG6 1241 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 BRPF3Q9ULD4 1205 aa13.16□□□□□ -0.3
UBA52-213ENST00000599551 COL4A3Q01955 1670 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 USP24Q9UPU5 2620 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 TGM5O43548 720 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 ZMYND10O75800 440 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 SPATA31D3P0C874 917 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 ITGA4P13612 1032 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 USP11P51784 963 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 CSTF1Q05048 431 aaKnown RBP13.15□□□□□ -0.3
UBA52-213ENST00000599551 DSC1Q08554 894 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 SNW1Q13573 536 aaKnown RBP13.15□□□□□ -0.3
UBA52-213ENST00000599551 SPATA31D4Q6ZUB0 917 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 PALB2Q86YC2 1186 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 KSR1Q8IVT5 923 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 EXOC8Q8IYI6 725 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 CCDC136Q96JN2 1154 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 COLEC11Q9BWP8 271 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 CHST7Q9NS84 486 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 FAM217BQ9NTX9 383 aaPredicted RBP13.15□□□□□ -0.3
UBA52-213ENST00000599551 GMEB2Q9UKD1 530 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 USP18Q9UMW8 372 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 COL4A3BPQ9Y5P4 624 aa13.15□□□□□ -0.3
UBA52-213ENST00000599551 KLF18A0A0U1RQI7 1052 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 DDX11L8A8MPP1 907 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 NCAM2O15394 837 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 LILRB5O75023 590 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 PSMD10O75832 226 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 STBD1O95210 358 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 ADRB1P08588 477 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 CDC27P30260 824 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 USP41Q3LFD5 358 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 UBXN11Q5T124 520 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 LILRA6Q6PI73 481 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 PARM1Q6UWI2 310 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
UBA52-213ENST00000599551 SLC7A3Q8WY07 619 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 NELL1Q92832 810 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 FGF14Q92915 247 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 FAM126AQ9BYI3 521 aaPredicted RBP13.14□□□□□ -0.31
UBA52-213ENST00000599551 LTB4R2Q9NPC1 389 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 CHD6Q8TD26 2715 aa13.14□□□□□ -0.31
UBA52-213ENST00000599551 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
UBA52-213ENST00000599551 ARL5CA6NH57 179 aa13.13□□□□□ -0.31
UBA52-213ENST00000599551 FAM170BA6NMN3 283 aa13.13□□□□□ -0.31
UBA52-213ENST00000599551 ADAMTS3O15072 1205 aa13.13□□□□□ -0.31
UBA52-213ENST00000599551 ERLIN2O94905 339 aa13.13□□□□□ -0.31
UBA52-213ENST00000599551 HNRNPA1P09651 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
UBA52-213ENST00000599551 HOXA11P31270 313 aaPredicted RBP13.13□□□□□ -0.31
UBA52-213ENST00000599551 MLH1P40692 756 aa13.13□□□□□ -0.31
UBA52-213ENST00000599551 PSMC5P62195 406 aa13.13□□□□□ -0.31
UBA52-213ENST00000599551 EXOSC10Q01780 885 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms