RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 DDHD2O94830 711 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 NPTXRO95502 500 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
C19orf54-208ENST00000598352 GALTP07902 379 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 ZSCAN22P10073 491 aaPredicted RBP13.72□□□□□ -0.21
C19orf54-208ENST00000598352 BMP1P13497 986 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 ITGA4P13612 1032 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 GTF2F1P35269 517 aaKnown RBP eCLIP13.72□□□□□ -0.21
C19orf54-208ENST00000598352 PEX3P56589 373 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 ERVFC1P60507 584 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 RAD51AP2Q09MP3 1159 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 MCM6Q14566 821 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 CTC1Q2NKJ3 1217 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 EEF1DP3Q658K8 133 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 ADGRD2Q7Z7M1 963 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 TMEM173Q86WV6 379 aaPredicted RBP13.72□□□□□ -0.21
C19orf54-208ENST00000598352 THNSL1Q8IYQ7 743 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 SPRYD3Q8NCJ5 442 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 GSTCDQ8NEC7 633 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 BCL7CQ8WUZ0 217 aaPredicted RBP13.72□□□□□ -0.21
C19orf54-208ENST00000598352 SPIRE2Q8WWL2 714 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 MRPS27Q92552 414 aaKnown RBP13.72□□□□□ -0.21
C19orf54-208ENST00000598352 RAD54LQ92698 747 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 CDK5RAP3Q96JB5 506 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 DRC1Q96MC2 740 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 UBE2ZQ9H832 354 aaPredicted RBP13.72□□□□□ -0.21
C19orf54-208ENST00000598352 C17orf75Q9HAS0 396 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 MIOSQ9NXC5 875 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 KCND2Q9NZV8 630 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 TFIP11Q9UBB9 837 aaKnown RBP13.72□□□□□ -0.21
C19orf54-208ENST00000598352 BDP1A6H8Y1 2624 aa13.72□□□□□ -0.21
C19orf54-208ENST00000598352 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 N4BP3O15049 544 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.21
C19orf54-208ENST00000598352 PLS3P13797 630 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 PPM1AP35813 382 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 LTBRP36941 435 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 SLC11A1P49279 550 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 PRPF4BQ13523 1007 aaKnown RBP13.71□□□□□ -0.21
C19orf54-208ENST00000598352 TJAP1Q5JTD0 557 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
C19orf54-208ENST00000598352 TMEM161BQ8NDZ6 487 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
C19orf54-208ENST00000598352 SYMPKQ92797 1274 aaKnown RBP13.71□□□□□ -0.21
C19orf54-208ENST00000598352 CALML4Q96GE6 196 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 ZFP42Q96MM3 310 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 GAD1Q99259 594 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
C19orf54-208ENST00000598352 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 TLR9Q9NR96 1032 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 DNAJB4Q9UDY4 337 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 GIT1Q9Y2X7 761 aa13.71□□□□□ -0.21
C19orf54-208ENST00000598352 RBM19Q9Y4C8 960 aaKnown RBP13.71□□□□□ -0.21
C19orf54-208ENST00000598352 A0A087X0B3 334 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 K7ERI5 159 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 ABLIM1O14639 778 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 SLC16A4O15374 487 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 ZC3H11AO75152 810 aaKnown RBP eCLIP13.7□□□□□ -0.22
C19orf54-208ENST00000598352 CSPG5O95196 566 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 F13A1P00488 732 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 AKAP5P24588 427 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 DDIT3P35638 169 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 MLH1P40692 756 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 ALDH7A1P49419 539 aaKnown RBP13.7□□□□□ -0.22
C19orf54-208ENST00000598352 KCNQ1P51787 676 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 ZNF131P52739 623 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 DSC1Q08554 894 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 DMP1Q13316 513 aaPredicted RBP13.7□□□□□ -0.22
C19orf54-208ENST00000598352 GIT2Q14161 759 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 GPBP1Q86WP2 473 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
C19orf54-208ENST00000598352 KCNN1Q92952 543 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 PABPC5Q96DU9 382 aaKnown RBP13.7□□□□□ -0.22
C19orf54-208ENST00000598352 IGSF21Q96ID5 467 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 ACO2Q99798 780 aaKnown RBP13.7□□□□□ -0.22
C19orf54-208ENST00000598352 REEP2Q9BRK0 252 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 VN1R3Q9BXE9 311 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 CXCL16Q9H2A7 254 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 PTPRHQ9HD43 1115 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 TNFSF13BQ9Y275 285 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 ZDHHC9Q9Y397 364 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 ZMYM2Q9UBW7 1377 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 PLXNA4Q9HCM2 1894 aa13.7□□□□□ -0.22
C19orf54-208ENST00000598352 POMCP01189 267 aa13.69□□□□□ -0.22
C19orf54-208ENST00000598352 HSP90AA1P07900 732 aaKnown RBP13.69□□□□□ -0.22
C19orf54-208ENST00000598352 LIG1P18858 919 aa13.69□□□□□ -0.22
C19orf54-208ENST00000598352 PROZP22891 400 aa13.69□□□□□ -0.22
C19orf54-208ENST00000598352 SCNN1GP51170 649 aa13.69□□□□□ -0.22
C19orf54-208ENST00000598352 CACNB1Q02641 598 aaPredicted RBP13.69□□□□□ -0.22
C19orf54-208ENST00000598352 RNASELQ05823 741 aaKnown RBP13.69□□□□□ -0.22
C19orf54-208ENST00000598352 ADAM15Q13444 863 aa13.69□□□□□ -0.22
C19orf54-208ENST00000598352 LEXMQ3ZCV2 418 aa13.69□□□□□ -0.22
C19orf54-208ENST00000598352 ATF7IP2Q5U623 682 aa13.69□□□□□ -0.22
C19orf54-208ENST00000598352 PDE12Q6L8Q7 609 aaKnown RBP13.69□□□□□ -0.22
C19orf54-208ENST00000598352 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
C19orf54-208ENST00000598352 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms