RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	FAN1	Q9Y2M0	1017 aa		11.73	□□□□□ -0.53
LSM4-205	ENST00000597776	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.73	□□□□□ -0.53
LSM4-205	ENST00000597776	ARL5C	A6NH57	179 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	SPDYE4	A6NLX3	237 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	BTBD18	B2RXH4	712 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776		F8W810	466 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	INO80B-WBP1	J3KQ70	363 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	B4GALT5	O43286	388 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	NEMF	O60524	1076 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	LILRB3	O75022	631 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	ALDH2	P05091	517 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	ITGA4	P13612	1032 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	KLRC2	P26717	231 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	AVPR2	P30518	371 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	TXK	P42681	527 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	OR1G1	P47890	313 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	SCNN1G	P51170	649 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	CLCN4	P51793	760 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	PTEN	P60484	403 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	MBTD1	Q05BQ5	628 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	MXD4	Q14582	209 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	AMHR2	Q16671	573 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	ATAT1	Q5SQI0	421 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	NOTUM	Q6P988	496 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	TAS1R1	Q7RTX1	841 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	PPFIBP1	Q86W92	1011 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	CDR2L	Q86X02	465 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	PIGO	Q8TEQ8	1089 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	ZFP42	Q96MM3	310 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	HSD17B14	Q9BPX1	270 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	EMILIN2	Q9BXX0	1053 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	NXF3	Q9H4D5	531 aa	Known RBP	11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	TTC12	Q9H892	705 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	SFXN1	Q9H9B4	322 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	MIOS	Q9NXC5	875 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	KANSL3	Q9P2N6	904 aa		11.72	□□□□□ -0.53
LSM4-205	ENST00000597776	POTEM	A6NI47	508 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	LYPLA2	O95372	231 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	UROD	P06132	367 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	NEFL	P07196	543 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	MYB	P10242	640 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	ARF4	P18085	180 aa	Predicted RBP	11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	GLRA2	P23416	452 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	ARL2	P36404	184 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	RARRES1	P49788	294 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	TFDP1	Q14186	410 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	MAEA	Q7L5Y9	396 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	GPR149	Q86SP6	731 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	DIS3L2	Q8IYB7	885 aa	Known RBP	11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	COLGALT2	Q8IYK4	626 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	UBALD2	Q8IYN6	164 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	ZDHHC14	Q8IZN3	488 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	CNNM3	Q8NE01	707 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	CCDC51	Q96ER9	411 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	CCDC43	Q96MW1	224 aa	Known RBP	11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	HERC2P3	Q9BVR0	1158 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	CSRNP2	Q9H175	543 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	TMEM60	Q9H2L4	133 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	MRPL17	Q9NRX2	175 aa	Known RBP	11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	ANKEF1	Q9NU02	776 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	DENND4A	Q7Z401	1863 aa		11.71	□□□□□ -0.53
LSM4-205	ENST00000597776	INPPL1	O15357	1258 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	USO1	O60763	962 aa	Known RBP	11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	DGAT1	O75907	488 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	SOD2	P04179	222 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	ATP2B1	P20020	1258 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	AKAP5	P24588	427 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	AXL	P30530	894 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	GUCY1B3	Q02153	619 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	DSC1	Q08554	894 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	ST3GAL1	Q11201	340 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	CCDC149	Q6ZUS6	474 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	RABGGTA	Q92696	567 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	B3GALT6	Q96L58	329 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	MTMR9	Q96QG7	549 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	RPS6KC1	Q96S38	1066 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	PRRX2	Q99811	253 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	TRIM6	Q9C030	488 aa	Predicted RBP	11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	UBN1	Q9NPG3	1134 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	GPRC5C	Q9NQ84	441 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	MAN1C1	Q9NR34	630 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	CACNG4	Q9UBN1	327 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	STK39	Q9UEW8	545 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	UST	Q9Y2C2	406 aa		11.7	□□□□□ -0.54
LSM4-205	ENST00000597776	TEX28	O15482	410 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	NPTXR	O95502	500 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	EFEMP2	O95967	443 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	SPATA31C1	P0DKV0	1188 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	MCM7	P33993	719 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	NEK4	P51957	841 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	POU5F1B	Q06416	359 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	NCBP1	Q09161	790 aa	Known RBP	11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	TRIM29	Q14134	588 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	RNF168	Q8IYW5	571 aa	Predicted RBP	11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	TMEM105	Q8N8V8	129 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	KLK14	Q9P0G3	267 aa		11.69	□□□□□ -0.54
LSM4-205	ENST00000597776	GIT1	Q9Y2X7	761 aa		11.69	□□□□□ -0.54

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