RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 TMEM173Q86WV6 379 aaPredicted RBP16.3■□□□□ 0.2
USE1-205ENST00000594724 DAW1Q8N136 415 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 RSPH1Q8WYR4 309 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 PPP2R3CQ969Q6 453 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 CDK5RAP3Q96JB5 506 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 GAD1Q99259 594 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 CCDC113Q9H0I3 377 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 NT5C3AQ9H0P0 336 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 NXF3Q9H4D5 531 aaKnown RBP16.3■□□□□ 0.2
USE1-205ENST00000594724 TLE6Q9H808 572 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 MIOSQ9NXC5 875 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 MTMR6Q9Y217 621 aa16.3■□□□□ 0.2
USE1-205ENST00000594724 ARL5CA6NH57 179 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 CCDC169A6NNP5 214 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 SFI1A8K8P3 1242 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 BMP15O95972 392 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 AKAP5P24588 427 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 SLC11A1P49279 550 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 PEX3P56589 373 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 CEBPZQ03701 1054 aaKnown RBP16.29■□□□□ 0.2
USE1-205ENST00000594724 PRPF4BQ13523 1007 aaKnown RBP16.29■□□□□ 0.2
USE1-205ENST00000594724 CLUL1Q15846 466 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 TMEM132AQ24JP5 1023 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 TMEM119Q4V9L6 283 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 PTCRAQ6ISU1 281 aaPredicted RBP16.29■□□□□ 0.2
USE1-205ENST00000594724 TMC7Q7Z402 723 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 PRIMPOLQ96LW4 560 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 AK8Q96MA6 479 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 ZFP42Q96MM3 310 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
USE1-205ENST00000594724 TCF25Q9BQ70 676 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 UBN1Q9NPG3 1134 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 ENTPD7Q9NQZ7 604 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 KANSL3Q9P2N6 904 aa16.29■□□□□ 0.2
USE1-205ENST00000594724 HIDE1A8MVS5 230 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 ACKR2O00590 384 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 STX6O43752 255 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 TBX10O75333 385 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 PLA2G4BP0C869 781 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 IL9P15248 144 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 MARCKSP29966 332 aaPredicted RBP16.28■□□□□ 0.2
USE1-205ENST00000594724 MLH1P40692 756 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 UBA7P41226 1012 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 NPTX2P47972 431 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 SCNN1GP51170 649 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 RBM10P98175 930 aaKnown RBP16.28■□□□□ 0.2
USE1-205ENST00000594724 MAPK7Q13164 816 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 PTPAQ15257 358 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 PDE12Q6L8Q7 609 aaKnown RBP16.28■□□□□ 0.2
USE1-205ENST00000594724 SYT2Q8N9I0 419 aaPredicted RBP16.28■□□□□ 0.2
USE1-205ENST00000594724 BCL7CQ8WUZ0 217 aaPredicted RBP16.28■□□□□ 0.2
USE1-205ENST00000594724 TMEM169Q96HH4 297 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 IGSF21Q96ID5 467 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 PDZD7Q9H5P4 517 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 KLK14Q9P0G3 267 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 PARP2Q9UGN5 583 aa16.28■□□□□ 0.2
USE1-205ENST00000594724 NPHP3-ACAD11A0A0J9YXS1 232 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 GRXCR2A6NFK2 248 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 K7ERI5 159 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 TNFRSF10AO00220 468 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 N4BP3O15049 544 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 ALDH2P05091 517 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 LONP1P36776 959 aaKnown RBP16.27■□□□□ 0.2
USE1-205ENST00000594724 NDUFV1P49821 464 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 EFNA5P52803 228 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 SLC12A3P55017 1021 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 DHX8Q14562 1220 aaKnown RBP16.27■□□□□ 0.2
USE1-205ENST00000594724 KARSQ15046 597 aaKnown RBP16.27■□□□□ 0.2
USE1-205ENST00000594724 SPECC1Q5M775 1068 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 NT5DC1Q5TFE4 455 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 EEF1DP3Q658K8 133 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 HSCBQ8IWL3 235 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 HACE1Q8IYU2 909 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 VPS52Q8N1B4 723 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 EFHBQ8N7U6 833 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 LRRC15Q8TF66 581 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 CALML4Q96GE6 196 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 DRC1Q96MC2 740 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 NGRNQ9NPE2 291 aaKnown RBP16.27■□□□□ 0.2
USE1-205ENST00000594724 FAN1Q9Y2M0 1017 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 GIT1Q9Y2X7 761 aa16.27■□□□□ 0.2
USE1-205ENST00000594724 NRP1O14786 923 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 INPPL1O15357 1258 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 CXCL14O95715 111 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 GLP2RO95838 553 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 GUCY2CP25092 1073 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 CA8P35219 290 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
USE1-205ENST00000594724 DUSP6Q16828 381 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 USP49Q70CQ1 688 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 KCTD17Q8N5Z5 321 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 GSTCDQ8NEC7 633 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 VN1R2Q8NFZ6 395 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 AUTS2Q8WXX7 1259 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 KMT5AQ9NQR1 393 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 SNTG2Q9NY99 539 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 CLEC1BQ9P126 229 aa16.26■□□□□ 0.19
USE1-205ENST00000594724 BARX2Q9UMQ3 279 aaPredicted RBP16.26■□□□□ 0.19
USE1-205ENST00000594724 SLC16A4O15374 487 aa16.25■□□□□ 0.19
USE1-205ENST00000594724 PLCG1P19174 1290 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms