RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SMG8Q8ND04 991 aaKnown RBP19.15■□□□□ 0.66
IRF3-208ENST00000594387 PLIN2Q99541 437 aa19.15■□□□□ 0.66
IRF3-208ENST00000594387 CDCA3Q99618 268 aaPredicted RBP19.15■□□□□ 0.66
IRF3-208ENST00000594387 TCF25Q9BQ70 676 aa19.15■□□□□ 0.66
IRF3-208ENST00000594387 MMTAG2Q9BU76 263 aaKnown RBP19.15■□□□□ 0.66
IRF3-208ENST00000594387 FZD8Q9H461 694 aa19.15■□□□□ 0.66
IRF3-208ENST00000594387 NRDE2Q9H7Z3 1164 aa19.15■□□□□ 0.66
IRF3-208ENST00000594387 C17orf75Q9HAS0 396 aa19.15■□□□□ 0.66
IRF3-208ENST00000594387 PARP2Q9UGN5 583 aa19.15■□□□□ 0.66
IRF3-208ENST00000594387 GIT1Q9Y2X7 761 aa19.15■□□□□ 0.66
IRF3-208ENST00000594387 TRIP11Q15643 1979 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 MEIS3P2A8K0S8 358 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 NT5C1B-RDH14C9J2C7 533 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 H3BQ06 376 aaPredicted RBP19.14■□□□□ 0.65
IRF3-208ENST00000594387 ACKR2O00590 384 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 B4GALT5O43286 388 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 HIP1RO75146 1068 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 POMCP01189 267 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 ERVFC1P60507 584 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 SMC1AQ14683 1233 aaKnown RBP19.14■□□□□ 0.65
IRF3-208ENST00000594387 AMHR2Q16671 573 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 PLPP4Q5VZY2 271 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 RPS6KC1Q96S38 1066 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 POLD4Q9HCU8 107 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 KCND2Q9NZV8 630 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 FAN1Q9Y2M0 1017 aa19.14■□□□□ 0.65
IRF3-208ENST00000594387 RBM19Q9Y4C8 960 aaKnown RBP19.14■□□□□ 0.65
IRF3-208ENST00000594387 STX6O43752 255 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 SMTNP53814 917 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 PEX3P56589 373 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 ADAM15Q13444 863 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 GIT2Q14161 759 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 CDR2LQ86X02 465 aaPredicted RBP19.13■□□□□ 0.65
IRF3-208ENST00000594387 EFHBQ8N7U6 833 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 SYT2Q8N9I0 419 aaPredicted RBP19.13■□□□□ 0.65
IRF3-208ENST00000594387 BSNDQ8WZ55 320 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 GAD1Q99259 594 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 TMEM175Q9BSA9 504 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 KMT5AQ9NQR1 393 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 CCDC39Q9UFE4 941 aa19.13■□□□□ 0.65
IRF3-208ENST00000594387 ARL5CA6NH57 179 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 KRT18P05783 430 aaKnown RBP19.12■□□□□ 0.65
IRF3-208ENST00000594387 GALTP07902 379 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 PLA2G4BP0C869 781 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 TXLNAP40222 546 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 C1orf186Q6ZWK4 172 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 ADGRD2Q7Z7M1 963 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 DDX53Q86TM3 631 aaKnown RBP19.12■□□□□ 0.65
IRF3-208ENST00000594387 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.12■□□□□ 0.65
IRF3-208ENST00000594387 IGSF21Q96ID5 467 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 PNMA5Q96PV4 448 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 HES2Q9Y543 173 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 CITO14578 2027 aa19.12■□□□□ 0.65
IRF3-208ENST00000594387 FSCN2O14926 492 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 CXCL14O95715 111 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 GUCY2CP25092 1073 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 GTF2F1P35269 517 aaKnown RBP eCLIP19.11■□□□□ 0.654e-10■■■■■ 32.8
IRF3-208ENST00000594387 MLH1P40692 756 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 STRN3Q13033 797 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 COL19A1Q14993 1142 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 CTC1Q2NKJ3 1217 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 DCAF4L1Q3SXM0 396 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 ZNF280BQ86YH2 543 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 VPS52Q8N1B4 723 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 RUSC1Q9BVN2 902 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 RNF39Q9H2S5 420 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 NXF3Q9H4D5 531 aaKnown RBP19.11■□□□□ 0.65
IRF3-208ENST00000594387 TMEM134Q9H6X4 195 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 DNAJB4Q9UDY4 337 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 CD207Q9UJ71 328 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 CLIC4Q9Y696 253 aa19.11■□□□□ 0.65
IRF3-208ENST00000594387 ZMYM2Q9UBW7 1377 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 GRXCR2A6NFK2 248 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 H0YCG3 227 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 PER2O15055 1255 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 DDHD2O94830 711 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 AKAP5P24588 427 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 OR1G1P47890 313 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 NPTX2P47972 431 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 SLC11A1P49279 550 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 CEBPZQ03701 1054 aaKnown RBP19.1■□□□□ 0.65
IRF3-208ENST00000594387 RAD51AP2Q09MP3 1159 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 RESTQ13127 1097 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 DHX8Q14562 1220 aaKnown RBP19.1■□□□□ 0.65
IRF3-208ENST00000594387 DUSP6Q16828 381 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 ATF7IP2Q5U623 682 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 KCNK18Q7Z418 384 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 ZNF396Q96N95 335 aaPredicted RBP19.1■□□□□ 0.65
IRF3-208ENST00000594387 COLEC11Q9BWP8 271 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 CCDC113Q9H0I3 377 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 PDZD7Q9H5P4 517 aa19.1■□□□□ 0.65
IRF3-208ENST00000594387 LARSQ9P2J5 1176 aaKnown RBP19.1■□□□□ 0.65
IRF3-208ENST00000594387 LINC01565O15544 149 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 MARCKSP29966 332 aaPredicted RBP19.09■□□□□ 0.65
IRF3-208ENST00000594387 LTBRP36941 435 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 SCNN1GP51170 649 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 CLUL1Q15846 466 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 TMEM119Q4V9L6 283 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 TCHPQ9BT92 498 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 KIFC3Q9BVG8 833 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms